Pectobacterium parmentieri RNS 08-42-1A: A8F97_12265
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Entry
A8F97_12265 CDS
T04513
Name
(GenBank) cyclodextrin-binding protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A8F97_12265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_12265
Transporters [BR:
ppar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
A8F97_12265
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AOR59674
UniProt:
A0A0H3I3X2
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Position
2697952..2699184
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AA seq
410 aa
AA seq
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MKMKTLTTVIMISLGITGVLSKSALAADKELLVWEDIKKSDGIADAIKAFEKQNNVKIKV
LETPYAQQIEKLRLDGPAGIGPDVIVMPHDQVGTAVVQGLISELKLDQAFLSSFTKPALE
AQTYNGKLYGVPKAVETTVLVYNKDLMPQPPEKFDDLFAFSKQQRAEGRYGLLAKFDEIY
YAYGVIAGMGGYIFGQNSNGSPNVKDIGLDKQATIDAVNYIKKFYTDGLFPPGIVGETGA
NAIDSLFTEKKAAAVITGPWAFQPYKNAGVNYGVAPLPLLPNGEHPRSLLGVKGYSISTY
SKNKDLAQKFIEFINQPEYAKVRFQLTGEIPPIAALVDDPLIKDDEKSRAVAIQSGYAVP
MPSVPEMQEVWTPANSALQLSVTGKQDTKAALESAVKVIKMQIEANHSNQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaacactgaccaccgtcattatgatttcactgggtatcaccggcgtgctc
agcaaatcagcgctggcagccgacaaagaacttctggtctgggaagatatcaaaaaatct
gacggcatcgccgacgcgataaaagcctttgaaaaacagaataatgtcaaaatcaaagtg
ctggagacgccttacgctcagcagattgagaaactccgtctggatggcccagcgggtatc
ggcccagatgtgatcgtgatgccacacgatcaggttggcaccgccgtggttcaggggtta
attagcgaattgaagctggatcaggcgttcctgtcgagtttcaccaaacctgcactggaa
gcgcaaacctataacggcaagctgtacggcgtgccgaaagcggttgaaaccaccgtactg
gtgtacaacaaagacctgatgccacaaccgccggaaaaattcgacgacctgttcgccttc
tctaaacagcagcgtgccgaaggtcgctatggtctgttggcaaaatttgatgagatttat
tacgcctatggcgtcatcgccgggatgggcggctacattttcggccagaacagcaacggg
tcaccgaatgtaaaagacatcggtctggataaacaagccaccatcgacgccgtcaactac
atcaagaaattctacacagatggcctgttcccgcccggtatcgttggtgaaaccggcgct
aacgccatcgactccctgtttactgagaaaaaggccgcagccgtgattaccggtccgtgg
gcattccagccgtacaaaaatgcaggcgtaaactacggcgtcgccccactgccgctgctg
ccaaacggcgaacacccgcgttcactgctgggtgtaaaaggctacagcatctccacctac
tccaagaacaaagatctggcacagaaattcattgagttcatcaatcagccggaatacgcc
aaagttcgcttccagttgaccggagaaatcccaccgattgccgcactggttgacgatcca
ctgattaaggatgacgaaaaatctcgtgctgtcgcgatccagtctggttatgccgtcccg
atgccgagcgtaccggaaatgcaggaagtctggacgccagccaacagtgcgctgcaattg
agcgtgacgggcaaacaggacactaaagcggcgttggagtccgccgtgaaggtaataaaa
atgcaaatcgaagctaaccacagtaaccagtaa
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