Pectobacterium parmentieri RNS 08-42-1A: A8F97_12315
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Entry
A8F97_12315 CDS
T04513
Name
(GenBank) multidrug transporter subunit MdtB
KO
K07788
multidrug efflux pump
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A8F97_12315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_12315
Transporters [BR:
ppar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
A8F97_12315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AOR59684
LinkDB
All DBs
Position
2711293..2714415
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AA seq
1040 aa
AA seq
DB search
MQDTVPASGGGPSRLFILRPVATTLLMFAILLAGIIGYRALPVSALPEVDYPTIQVVTLY
PGASPDVVTSAITAPLERQFGQMSGLKQMSTQSAGGASVITLQFQLELSLDVAEQDVQAA
INAASNLLPSDLPYPPTYSKVNPADPPIMTLAVTSTAMSMTQVQDMVDNRIAQKISQVAG
VGLVSLAGGQRPAVRVRLNAPALAAYGLTSETIRTAITAANVNSAKGSLDGPTRSVTLSA
NDQMKSVDDYRKLIVAWKNGAPVRLQDVATIEQAAENIHLGAWANRQQAIIINVQRQPGA
NVITTTDSINKMLPALKASLPNSVDVTTLTDRTTSIRASVKDVQFELLLAIALVVMVIYL
FLRNAVATLIPSIAVPLSLVGTFAAMYFLGFSINNLTLMALTIATGFVVDDAIVVIENIS
RYIEKGEKPLNAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVSI
LISAVVSLTLTPMMCARMLSHQSLSKQNRFTRASERFFTRLITVYGVWLRKVLNHPWLTL
SVALGTLLLTILLYIWIPKGFFPIQDNSIIQGTVQAPQTVSFSNMADRQQRVVSIIMKDP
AVESISSYVGVDGTNAALNSGRLQINLKPLSERSERIQAIISRLQQQTAQIPGIQLYLQP
VQDLTIDTQISRTQYQFTLQAMSLDELSVWVPKLMTDLKKLPQLEDVSSDWQDGAAVAYV
NVDRDSASRLGITMSQVDSALYNAFGQRLVSTIYTQASQYRVVLEHDTTNNTGLDALNDV
RLISSDGGTIPLSSIATIEERQGPLAINHIDQFPSTTISFNVASGYALGEAVDAITQAEQ
QMNLPADITTRFQGSTLAFQSALSSTVWLIIAAIVAMYIVLGVLYESFIHPITILSTLPT
AGVGALLALMMAGNELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMTPYDAIYQA
CLLRFRPILMTTMAALLSALPLMLSTGVGAELRQPLGVCMVGGLIMSQILTLFTTPVIYL
LFDRLAARFRRAPHQEEETE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataccgttccagccagcggaggcggaccatcacgcctgtttattctacgcccc
gtcgcgacgacgctgctgatgttcgccattttgttggccggcatcattggctatcgggca
ctgcccgtttcagccctgcctgaggttgattatccgacgattcaggtcgttaccctgtat
ccgggagccagccccgacgtagtgacctcggcgattaccgcgccgctggaacggcagttc
ggccagatgtccgggctaaaacagatgtcgacgcagagcgcaggcggcgcatccgtcatc
acgcttcaattccagcttgagctgtcgctggatgtcgcggaacaggatgtgcaggctgcc
attaatgcggccagcaatctgttgccaagcgatctgccctatccacccacttacagcaaa
gtgaacccggctgacccgcccattatgacgctggccgtcacctccaccgcgatgtcgatg
acgcaggtgcaggacatggtggacaaccggatcgcgcaaaaaatttcgcaggtcgcgggc
gtcgggctggtgtcgttagccggtggccagcgaccggccgtgcgggtaaggctaaacgcg
ccagcgctggcggcttacggtctgaccagcgaaactattcgcaccgcgattaccgccgcc
aacgtgaattccgccaaagggagtctggatggtccgacgcgttcagtgacgctctccgcc
aacgaccagatgaaatctgttgatgattaccgcaagctgattgttgcgtggaaaaacggc
gcgccggtaaggcttcaggatgtcgccacgattgagcaggccgccgagaatattcatctc
ggtgcctgggcgaatcggcagcaggcgatcattatcaacgttcagcgccagccaggtgct
aacgttatcacgacgacggatagcattaacaagatgctgcccgcgttaaaagccagcctg
ccgaactctgtggatgtcactacgctgactgaccgcaccaccagtattcgcgcctcagta
aaagacgtccagttcgagctactgctggcgatcgcgctggtcgtgatggtgatttacctg
ttcttgcgtaacgccgtcgccacgctgatcccaagcattgccgtaccgctatcgctggtt
ggcacctttgccgccatgtatttcctcggtttttccatcaataacctgacgttaatggca
ctcaccatcgccacgggtttcgtggtagatgatgccatcgtggtgatcgaaaatatctcc
cgctatatcgaaaaaggggaaaagccgcttaacgcggcgctgaaaggggcgggagaaatc
ggcttcaccatcatttctctgaccttctcactcatcgccgtgctgatcccactgctgttt
atgggcgatatcgtcggacgcttgttccgcgagtttgccgtaacgctagcagtgtcgatc
ctgatttccgccgtcgtgtcgctcacgctcaccccgatgatgtgtgcccgcatgctgagc
catcagtcgctgagtaaacagaaccgttttactcgcgccagtgaacgtttcttcactcgc
ctgattactgtctacggcgtctggttacgcaaagtactgaatcatccgtggctgacgctg
agcgtcgcgctcggtacgctgctgctcactatcctgctctatatctggatcccgaagggc
ttcttcccgatacaagataacagcatcattcagggcaccgtacaggcaccgcagacggtc
tcgttcagcaatatggctgaccgccaacagcgcgtcgtgtctattatcatgaaggaccct
gcggtagagagcatttcctcatacgtcggcgtcgatggcacgaatgccgcgctgaacagc
ggccgactgcaaatcaacctgaaaccgctcagtgaacgcagtgagcgtattcaggcgatc
atcagtcgcctgcaacagcaaacggcccagattcccggcattcagttgtatctgcaaccg
gtgcaggatctcaccatcgacacccagattagccgcacgcaatatcagtttacgttacaa
gcgatgtcgctggatgaactgagcgtttgggtgccgaagctgatgaccgacttgaaaaag
ctaccgcagctagaggatgtcagcagcgactggcaagacggtgctgcggtcgcctacgtc
aacgtcgatcgcgacagcgccagtcgtctgggtatcacgatgtcacaggtcgacagcgca
ctgtataacgcttttggtcagcgtctggtttccactatttatacgcaggccagccaatac
cgcgtggtgctggaacacgatacgaccaacaataccggtctggacgcgttgaacgacgtg
cgcctcatcagcagcgacggcggtacgatcccgctcagcagcatcgccacgattgaagag
cgtcaggggccgctggcgatcaaccatatcgaccagttcccctcgacgacgatctctttc
aacgtcgccagcggctacgcactaggcgaagcggttgatgccatcacgcaggccgaacaa
cagatgaatctgcctgcggatatcactacccgttttcaaggcagtacgctggcgttccag
tcggcgctgagcagcaccgtgtggctcatcattgcggcgattgtcgcgatgtacattgtg
ctcggcgtgctatacgaaagctttattcatccgatcaccatcttatctacgctgccaacg
gcgggtgtcggtgcgctgctggcactgatgatggcggggaatgagctggatgtgattgcc
attatcgggatcatcttgctcatcgggatcgtgaagaaaaacgccatcatgatgatcgac
ttcgcgctagcagcggagcgagaacaggggatgacaccgtatgacgccatttatcaggcc
tgtctgctgcgttttcgaccgattctgatgaccacgatggccgccctactcagtgcgcta
ccgctaatgctgagcaccggcgtcggcgcggaactgcgccagccgctaggggtctgtatg
gtcggtggcctgatcatgagccagattctgacgctgtttacgacaccagtaatttacctg
ctgtttgaccgcctggcagcgcgcttccgtcgtgcaccgcatcaggaggaagaaaccgag
tga
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