Pectobacterium parmentieri RNS 08-42-1A: A8F97_13085
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Entry
A8F97_13085 CDS
T04513
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8F97_13085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppar03019
]
A8F97_13085
Enzymes [BR:
ppar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
A8F97_13085
Messenger RNA biogenesis [BR:
ppar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A8F97_13085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AOR59828
UniProt:
A0A0H3I3F6
LinkDB
All DBs
Position
2892314..2893672
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AA seq
452 aa
AA seq
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MVESEEPRQHLTVIPRDQHTISRSDISDNALKVLYRLNKAGYEAYLVGGGVRDLLLGKKP
KDFDITTNATPDQVRKLFRNCRLVGRRFRLAHIMFGPEVIEVATFRGHHDQHQEQQEVKN
SSQQAQSGMLLRDNIFGSVEEDAQRRDFSINSLYYSISDFSVRDYTNGLNDLRQGVIRMI
GDPETRYREDPVRMLRAVRFAAKLNMTVSPETAEPIPRLASLLHDIPAARMFEESLKLLQ
SGYGYPTYKMLCEYQLFQPLFPLLSRHFTPNGDSTLERMVAQVLKNTDQRLQNDMRVNPA
FLFSAMLWYPLIEHAQKLAQESGLAYFDAFALAMNDVLDEQCRSLAIPKRITSLVRDIWQ
LQTRLSRRQGKRAYKLMEHPKFRAAYDLLCLRAEIENHQELLRLAQWWGEFQVATPPRQQ
TMLRSLDDGPTPHRRSRPRRPRKPTTARRDQA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaatcagaggaaccacgtcagcatctgacggtgatcccgcgtgaccaacatact
atttcacgcagtgacatcagcgataatgcgctgaaagtactttatcgcctgaataaagcg
ggctacgaagcttatctggttggcggcggagtacgcgatctgctgctgggcaaaaagccg
aaggattttgatatcaccactaacgccacgcccgatcaggtgcgcaagttgttccgcaac
tgtcgtttagttgggcgtcgtttccgtctcgcacatatcatgttcgggccagaggtgatt
gaagttgccacgttccgtggtcaccacgatcagcatcaggagcagcaagaagtcaaaaac
tcttctcagcaggctcaaagcggcatgctgttgcgcgataacatttttggttcggtagaa
gaagacgcccaacgccgtgatttctcgatcaatagcctctactacagcatttctgatttc
agtgttcgcgattataccaatggcctgaacgatctgcgtcagggtgtcattcgcatgatc
ggcgatcctgaaacgcgctaccgagaagatcccgtgcgcatgctgcgtgccgttcgtttc
gccgccaagttgaacatgaccgtcagcccggaaaccgccgaaccgattcctcgtctggcc
tcattgctgcacgatattcccgccgcgcggatgtttgaagaatcgctgaagctgcttcag
tcaggctatggctatccaacctataaaatgctgtgtgaataccaactgttccagccgctt
tttccgctgctgagccgtcatttcacaccaaacggcgattccacattggaacgcatggtt
gctcaagtgttgaaaaacaccgatcaacgtttgcagaacgacatgcgggtaaatccggca
tttttgttctctgccatgctgtggtatccgctgattgaacatgcgcaaaagctggctcag
gaaagcggtctggcctacttcgatgcatttgcgctggcaatgaacgatgtactggacgaa
cagtgccgttctctggcgatccctaagcgtattacctcgttagtccgcgatatctggcaa
ctgcaaacgcgcctgtctcgtcgtcagggtaagcgtgcttataagctaatggaacatcct
aaattccgcgctgcgtatgatctgctttgcctgcgtgccgaaattgaaaatcatcaggag
ctgctgcgtctggctcagtggtggggagaattccaggttgcaacaccgccacgccaacaa
accatgctgagatcgctggatgacggcccaacaccacatcgtcgctcccgccctcgtcgt
ccacgtaaacctacaacagcacgcagggatcaagcctga
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