Pectobacterium parmentieri RNS 08-42-1A: A8F97_14175
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Entry
A8F97_14175 CDS
T04513
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_14175
Transporters [BR:
ppar02000
]
Other transporters
Pores ion channels [TC:
1
]
A8F97_14175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AOR60033
LinkDB
All DBs
Position
complement(3121537..3123735)
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AA seq
732 aa
AA seq
DB search
MITKKHTLWALNPLLLAMMAPAVAQQSSDDTLVVSANRTNRTVAQMAQTTWVIEKAELEQ
QIQGGKELKDALAQLIPGLDVSSQSRTNYGMNVRGRPLVVLVDGVRLNSSRTDSRQLDSI
DPFNIDHVEVISGATALYGGGSTGGLINIVTKKGQPDTQMEFETGIKSGFNSSKDHDERV
ASAISGGNDRISGRASVAYQKFGGWFDGNGDATLLDNTQTGLQYSDRLDVMGTGTLNIDD
TQQLQLVTQYYKSQGDDDYGLNLGKDFSAISGATKPYVSSGLHSDRIPGTERHLISLQYS
NSDFLGQELVGQVYYRDESLLFYPFPTVNANKQATAFSSSQQDTDQYGAKLTLNSEPLDG
WQLTYGLDADHERFTSNQMFFDLAQANASGGMNNKRIYTTGRYPGYDITNLATFLQSSYD
INDIFTLSGGVRYQYTENKIDDFIGYAQQQQIAAGRAQSADAIPGGSVDYDNFLFNAGLL
VHLTERQQAWFNFSQGVELPDPGKYYGRGTYGAAVNGHLPLTNSVNVNDSELEGVKVDSY
ELGWRFSGDNLRTQIAAYYSISDKNVKANKDLTISVVDDKRRIYGVEGAVDYFIPDTDWS
TGANFNVLKTESKVNGSWEKYDVKVASPSKATAYIGWAPDPWSLRVQSTTSFDVSDAQGY
KIDGYTTVDLLGSYDLPVGKLSFSVENVFDRDYTTVWGQRAPLYYSPGYGPASLYNYKGR
GRTFGLNYSLLF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgataaccaaaaagcatacgctctgggcccttaacccgttgttgctcgccatgatggcg
ccagcggtcgcacagcagagcagtgacgacacgttagtggtttccgccaaccgcaccaac
cgtacggtggcgcaaatggcgcaaaccacgtgggtgattgaaaaagccgaactggagcag
cagatccagggcggtaaagagctgaaagacgcactggctcagttgatccccggtcttgac
gtcagcagccagagccgtaccaactacgggatgaacgtgcgtggccgtccgctggtcgtg
ctggtggacggcgtgcgtctgaactcgtcgcgcaccgacagccgccaactcgattccatc
gacccgttcaatatcgaccacgttgaagtgatctccggggccaccgcgctgtacggtggc
ggtagtaccggcggccttatcaatattgtgactaaaaaaggccagccggatacccagatg
gagtttgagacggggatcaagagcggtttcaacagcagtaaggatcacgatgagcgcgtt
gccagcgccatctccggcggcaacgaccgtatctccgggcgcgcatcggtggcgtaccag
aagttcggcggctggtttgacggtaacggcgacgcgactctgctcgataacactcagact
ggcctacagtattccgaccgtctggacgtgatgggcaccgggacgctgaatatcgatgat
acccaacagcttcagttggttacccaatattataaaagccagggtgacgacgattacggg
ctgaacctcgggaaagatttttcggcaatcagcggcgcgaccaagccatacgtcagtagc
ggcctgcattcagaccgtattccgggcaccgagcgtcatctcatcagcctgcaatactcg
aatagcgatttcctcggtcaggaactggtcggccaggtctattaccgcgatgaatcgctg
ctgttttatccgttcccgaccgtcaacgcgaacaaacaggccaccgcgttctcctcatcg
cagcaggacacggaccagtatggcgcgaagctgaccctcaacagcgaaccgctggacggc
tggcagttgacctacgggctggatgcggatcacgagcgctttacctctaaccagatgttc
ttcgatctggcccaagcaaacgcttccggtgggatgaacaacaagcggatttacaccacc
ggacgctatccggggtatgacatcactaacctggcgaccttcctgcaatccagctatgac
atcaatgatatctttaccctgagcggcggtgtgcgctatcagtacaccgagaacaagatt
gatgatttcattggctacgcgcagcaacagcagattgccgccgggagggcgcagtccgcc
gatgcgatcccgggcgggtcggtcgattacgacaacttcttgtttaacgccggtctgctg
gttcatctgaccgaacgccagcaggcgtggttcaatttctcccagggcgtggagctgccg
gatccgggtaaatactacgggcgcggcacctatggcgcagcggtgaacgggcaccttccg
ctgaccaacagcgtgaacgtgaatgacagcgaactggaaggcgtgaaggtcgactcctac
gagctgggctggcgcttctccggcgataacctgcgtacgcaaatcgcggcctactactcg
atttccgataagaacgtgaaggcaaataaagacctgaccatcagcgtggtcgatgacaag
cgccgcatctacggcgtggaaggcgcggtggactactttatcccggacaccgactggagc
accggtgcgaacttcaacgtgctgaaaaccgagtctaaagtgaacggtagctgggaaaag
tatgatgtgaaggtggcgagcccgtcgaaagcaacggcctacatcggttgggcaccggat
ccgtggagcctgcgcgtacagagcaccacttccttcgacgtcagcgacgctcagggctac
aaaatcgatggttacaccacggttgatctgctcggtagctatgatctgccggtgggtaaa
ctcagcttcagcgtggagaacgttttcgatcgcgactacaccaccgtctggggccagcgc
gcgccgctgtactacagcccgggctacggtcctgcgtcgctgtacaactacaaagggcgt
ggccgcacctttggcttgaactactcactgctgttctaa
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