Pectobacterium parmentieri RNS 08-42-1A: A8F97_14905
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Entry
A8F97_14905 CDS
T04513
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppar03016
]
A8F97_14905
Enzymes [BR:
ppar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A8F97_14905
Transfer RNA biogenesis [BR:
ppar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A8F97_14905
Prokaryotic type
A8F97_14905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AOR60175
UniProt:
A0A8B3FMI2
LinkDB
All DBs
Position
complement(3288068..3289012)
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AA seq
314 aa
AA seq
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MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATDLEQALESFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVAAYPTERMVTLEQLATLAEQAQTEELALSLTLDPL
LMPMESPVIDFPEVNLPPVVAGYLKLGQAVQAAHAPLNGMVRITEGDAHKFIGMGEIDDD
GRVAPRRLVVEFPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgccgtggccgtgatgtacacggcgtattgttattagataagccg
caaggcgtgtcgtctaatgatgttttgcagaaagtaaaacggatttttaacgctaacaga
gcgggtcatacaggggcgttggatccattagccaccggtatgctgccgatttgtcttggg
gaagcgacaaagttttcccaatatttgctggattctgataaacgctaccgtgtcattgct
cgccttgggcaacgcactgatacctctgatgccgatggcaacgtgattgaagaacgtgct
attggtttttctgctacggatctggagcaggcgctggagagttttcgcggtactacgcag
caagtaccatccatgtactcagcgctgaaataccaggggcgtaagttgtatgagtacgca
cgccaggggctgacggttccgcgtgaagcacgtgaaattaccgtttacgaacttcagttt
attcgctgggaaggcgatgagttggagctagagatccactgctcgaaagggacgtacatc
cgtaccatcattgacgatctgggtgaaaagctgggatgtggtgcgcatgtgatttacctg
cgtcgcttgcaggttgctgcgtatccgactgaaagaatggtgacgctggaacaactggct
accttggccgagcaggctcagactgaagagctcgcactttctctgacccttgaccctcta
ttgatgccgatggaaagcccggttattgatttccctgaagtgaatttgccacccgttgtc
gcaggctatttgaagcttggacaggctgttcaggcagcgcatgcgccgttgaacggcatg
gtgagaatcaccgagggagacgcgcataaatttatcggaatgggtgaaattgacgacgat
ggtcgcgttgcgccgcggcgtctggttgttgagtttccagtgtaa
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