Pectobacterium parmentieri RNS 08-42-1A: A8F97_15115
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Entry
A8F97_15115 CDS
T04513
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_15115
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A8F97_15115
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
MptE-like
HTH_23
HTH_3
MarR_2
HTH_Tnp_ISL3
HTH_38
HTH_7
HTH_31
HTH_IclR
Sigma54_DBD
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AOR60214
UniProt:
A0A8B3F6A7
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All DBs
Position
3333925..3334866
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AA seq
313 aa
AA seq
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MNKLTIKDIAALCKVGKSTVSRVLNNDQNVNEVTRQKVLAVIEQYQFTPSKSARAMRGLA
SRTVGIIVTRLDSYAENQTVRAILPLLHANGIDPIILESQFDPKKVDEHLTMLERRKIDG
VILFAFTGIASEQLASWQQRIVIIARSFDGYTCVCNDDTGTVNHLMEFLHQEKKFNQIGY
IGIDLQDETTGLLRFKAYENYCQQHRLTINAELGELNFQSGYLLAQKVLSSRPQAILCAT
DSLAFGVQKYLKTQMINDVFVACIGRNDLLKFLFPETKTCRLGFRESGELSANLLINIIN
DNFSPKTHIVLSS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattgacgataaaagacatagcggccctttgtaaggtgggaaaatcgactgtt
tcccgtgtactcaataacgaccagaatgttaatgaagttacacgccaaaaagtgctcgcg
gtgattgagcagtatcaattcacaccgtcaaaatcagccagagcgatgcgtggattagcg
agccgaaccgttggaattatcgtgacccgccttgattcttatgcagaaaaccaaacagta
agagccattttaccccttttgcatgctaatggtatcgaccctattattctggaaagccag
ttcgaccccaaaaaagttgatgaacatttaactatgttggaacggcgaaagattgatggc
gtcatattattcgccttcacagggatcgccagtgaacagttagcgtcctggcagcagcgt
atcgtcatcatcgcgcgttcatttgacggttatacctgtgtttgtaatgacgatacaggt
accgtaaatcatctcatggaatttttgcatcaagaaaaaaaattcaatcaaattggttac
atcggtattgatttacaagatgaaacaaccgggttactccgttttaaagcctacgaaaat
tattgccagcaacatcgattaaccattaatgccgagttaggggaactcaattttcaaagc
ggttacctgctcgcacaaaaggtactttcctcgcgtccccaagccattttatgcgccaca
gactcattagcctttggcgtacaaaaatacttaaaaacccaaatgatcaatgatgttttt
gtagcttgcattggccgaaatgatttactgaaatttttatttcccgaaacaaaaacctgc
cgtttagggttccgcgaaagcggcgaactctctgccaacctgttgattaacattattaac
gataatttctcaccaaaaacacacattgttttatcttcttga
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