Pectobacterium parmentieri RNS 08-42-1A: A8F97_16500
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Entry
A8F97_16500 CDS
T04513
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A8F97_16500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_16500
Transporters [BR:
ppar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
A8F97_16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Methyltransf_4
DUF6984
Motif
Other DBs
NCBI-ProteinID:
AOR60481
UniProt:
A0A8B3FHM1
LinkDB
All DBs
Position
3648911..3649888
Genome browser
AA seq
325 aa
AA seq
DB search
MKLSKTLIGICLGSTAFLMSQAIQAQQIKASDVHPEGYPNIVAVQKMGEKLKSATNGRLE
IKTFPGGVLGDEKQMIEQAQLGAIDIIRVSMTPVAAILPEIEVFTLPYIFRDEDHLHKVL
DGKIGQEIGDKITHSSKSKLVFLGWMDAGTRNLITKQPVAKPEDLKGMKIRVQTSQVALA
TLKAMGANAIAMGTSEVFSGMQTGVIDGTENNPPTYVAHNYMPVAKNFTWSRHFIIPELF
LYSKTKWDKLSKEDQDLILKLAKEAQQEQRVLWNEYTQQSLDKMKAGGVQFHETDNEYYF
KATQPVRDQFGAKYQDLIKAVADVQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtcgaaaacattgatcggcatttgtctgggttctactgcattcctgatgagc
caagcgattcaggcacaacaaattaaagcctctgatgttcaccctgaaggttatcctaat
atcgtcgccgtacagaaaatgggagaaaaattaaaatctgctaccaatggcaggctggaa
attaaaaccttccccggcggcgtattaggggatgagaagcaaatgattgaacaggctcag
ctcggtgcaattgatattatccgtgtttcaatgacgcccgttgccgctattttaccagaa
atagaagtcttcaccctgccctatattttccgtgatgaagatcatctgcataaagtgctg
gatggaaaaatcggtcaggaaattggtgacaaaattacccatagcagtaaatcaaaattg
gttttcctgggctggatggatgcgggaacgcgtaatttaatcaccaagcaacccgtggcg
aaaccagaagacctcaaaggtatgaaaattcgagttcaaaccagccaggttgctctcgca
acgctgaaagctatgggcgctaacgccatcgctatgggcaccagcgaagtcttcagcggc
atgcaaaccggagtgattgacggcaccgaaaataatccaccaacttatgtggcacataac
tacatgcctgttgccaagaatttcacctggagtcgccacttcattattcctgagctgttc
ctgtactccaaaaccaaatgggataagctttccaaggaagatcaggatctgatcctgaaa
ctggcgaaagaagcgcagcaagagcagcgcgtactgtggaatgaatatactcagcaatcc
ctggataaaatgaaggccggtggcgttcagttccatgaaaccgataacgagtactatttc
aaagcgacacagcctgtacgcgatcaatttggtgccaaatatcaggatctgattaaagcc
gtcgccgacgtccaataa
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integrated database retrieval system
