Pectobacterium parmentieri RNS 08-42-1A: A8F97_17505
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Entry
A8F97_17505 CDS
T04513
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_17505
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A8F97_17505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
HTH_91
TetR_N
HTH_Tnp_ISL3
AIRS
Motif
Other DBs
NCBI-ProteinID:
AOR60668
UniProt:
A0A0H3HYB8
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All DBs
Position
3860829..3861872
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AA seq
347 aa
AA seq
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MKQKKVVTTATMKDVADEAGVSTATVSRTLMNPDKVSATTRRKVEQAVIAVGYSPHALNR
NLKRNESRTILTIVPDICDPYFSEIFRGIEETAAEHGYLVLIGDCAHQHQREKTFVDLII
TKQIDGMVLLGSNLPFDAGQEEQRNLPPMVMANEFSPDLALPTVHIDNLTAAFEAVHYLH
QAGHQRIACIAGPEHMHLSQYRLQGYIQALRRNGILIDNQYIFQGDFTYETGINGLVALM
QHPQPPSAIFCHSDLMALGVLAQARKMGLDIPRDLSVIGFDDIEQAQYCWPSLTSVAQPR
YQIGREAMLLLLEQLQGNTVQSGSRLLSSELVIRDSVAAPNYARNRL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagaagaaagtcgttaccacggcgacgatgaaagacgtggcggatgaggccggc
gtttccaccgccaccgtatcccgaacgttaatgaacccagataaagtctctgcgaccacc
cgcaggaaggtcgagcaggctgtcatcgccgttggctattcgcctcacgcactcaaccga
aacctcaagcgtaatgaatcacgcacgatcctgacgatcgtgccagacatctgcgatccc
tatttctccgaaatatttcgtgggatagaggaaacggctgccgaacacggttatctggtg
ttgattggcgattgcgctcaccaacatcaaagggaaaaaaccttcgtcgatctgattatt
accaaacagatcgacggcatggtgttgctcggctccaatctgccatttgacgcaggccag
gaagagcagcgtaatctgccaccgatggtgatggcgaatgagttctcaccggacctggca
ttgccaaccgtgcatatcgataacctgaccgccgcctttgaagccgtacattatctgcat
caggcaggccaccagcgcatcgcctgcattgccggcccggagcacatgcatctgagccaa
tatcgcttgcaggggtacattcaggctctgcgccgtaatggcattcttatcgataaccaa
tacatctttcagggtgatttcacctatgaaacggggatcaacggcctggttgcgctgatg
cagcatccgcaaccgcccagcgccatcttctgtcatagcgatctcatggcgctgggcgtg
ctggcgcaggccagaaaaatggggctggacatcccgcgcgatctctccgttattggcttc
gacgatatcgaacaggcgcagtactgctggccttccctcacttctgtcgctcaaccacgt
tatcagatcggacgcgaggcaatgctgctactcttagagcagttgcaaggtaatacggta
caaagcggctctcgcctgttgtccagcgaactggtcatacgcgatagtgtcgccgcaccg
aattacgcccgtaacaggctttaa
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