Pectobacterium parmentieri RNS 08-42-1A: A8F97_18330
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Entry
A8F97_18330 CDS
T04513
Name
(GenBank) transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_18330
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A8F97_18330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
TetR_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AOR60831
UniProt:
A0A0H3HWF4
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Position
4046385..4047398
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AA seq
337 aa
AA seq
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MVTMLDVAKKAGVSKATVSRVLTGNNYVSKTTRDRVFQAIEEIGYRPNLLARQLATSKSQ
IIGLVVTNTLYSGPYFSELLFQTATMTEKYGRQLIMADGKHSAEEEREAIQFLLDLRCDA
VIIYPRFLSIDALESIIEQHEQPIMVVNRTLHQHSDNGICTNHQQHSHDAVNYLIAQGHR
DIAFICGSSNSPTGTSRLAGYRQALVDNGIPCDDRLVAPGDWTHDSGYAAAKALLQRTAA
FSALVASNDDMAIGAAKALREHGLAIPQDVSLLGFDDLPMASWFHPALTTVHVPVAEMIN
YTLEKLLCRLEGETVVPAPAFKGTLIIRDSVRKGPAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccatgctcgatgtcgcaaaaaaagccggtgtatccaaagccaccgtatcacgc
gtgctgacagggaataactatgtcagtaaaactacgcgggatcgggtattccaggccatt
gaagagattggttatcggcccaacctactggcccgccagctcgctacgagcaaatcgcaa
atcattggtttggttgtaaccaacacactgtacagcggcccctacttcagcgaattactg
ttccaaacggcaaccatgacggaaaaatacggccgtcaactcatcatggcggatggcaaa
cacagcgctgaagaagagcgggaagcgatccaattcttgctcgatttacgctgcgatgcc
gttattatctacccgcgctttctgtctatcgatgcgctggaaagcattatcgaacagcat
gaacagccgatcatggtcgtgaaccgtacactgcatcagcacagtgataacggtatctgc
accaatcaccagcaacacagccatgatgccgtcaattacctgattgcacagggtcaccgt
gatatcgcgtttatctgcggatcatcaaactcccccaccggtacaagcaggctggcgggc
tatcgacaagcgttagtggacaacgggattccctgtgatgacaggctggtggcaccaggc
gactggacccatgatagcggttatgcggcggcaaaagcgctgcttcaacgaactgccgcc
ttcagcgcactggttgccagcaatgacgacatggcgattggcgcggcgaaagcactacgt
gaacatggcctcgcgattccgcaggatgtttcactgctggggttcgacgatttaccgatg
gcatcatggttccatccggcactgactaccgtgcatgtgcccgtcgccgagatgatcaac
tacacccttgagaaactgctgtgtcggttagagggggaaaccgtcgtacctgcaccagcc
ttcaaaggcacattaatcatccgcgattccgttcgcaaaggtccagcagcctaa
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