Pectobacterium parmentieri RNS 08-42-1A: A8F97_18785
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Entry
A8F97_18785 CDS
T04513
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar02020
Two-component system
ppar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A8F97_18785
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A8F97_18785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppar02022
]
A8F97_18785
Two-component system [BR:
ppar02022
]
OmpR family
QseC-QseB (quorum sensing)
A8F97_18785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
AOR60922
UniProt:
A0A0H3I9S8
LinkDB
All DBs
Position
complement(4148837..4149499)
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AA seq
220 aa
AA seq
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MRILLIEDDRLIGDGLKAGLTKLGFTIDWFTEGKAGAAALKAAPYDAVVLDLSLPGMDGM
DILRQWRQAGHDEPVLILTARDALEQRVEGLQQGADDYLCKPFALTEVAARLQALIRRRH
GQLQPELTHGSVSLEPGSRSVTLNCEPLILKSRELALLELFLLNPNRVLTRAQLEEKLYG
WDDDVSSNAVEVHIHHLRKKLGSGFIRTVHGIGYILGDAP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattgttaatcgaagacgatcgcctgatcggtgatggcctaaaagctgggttg
accaaactgggctttactattgactggtttacggaaggtaaagcgggtgccgccgcattg
aaggccgcaccttatgatgcagtggtgctcgatctcagcctgccgggtatggatgggatg
gatatcctacgccagtggcgtcaggctggacatgacgaaccggtactgattctgaccgcc
cgtgatgcgctggaacagcgcgtggaagggttgcaacagggtgccgatgattatttatgt
aagccctttgcactgacggaagttgccgctcgtctacaggcactgattcgccgccgtcac
ggtcagctccaacctgaattaacgcacggttcggtttcccttgaaccgggctcgcggagc
gtcacgcttaactgcgagccgttgatactaaaatcccgcgaactggcgctgctggaactg
tttttgctcaatccaaaccgtgtactcacccgtgcgcagttagaagaaaagctctatggg
tgggacgatgatgtctccagcaatgcggtcgaagtacatatccaccacctgcgcaaaaag
ctgggcagcgggtttatccgtaccgtgcatggcattggctatattctgggggacgcacca
tga
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