Entry |
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Name |
(GenBank) (p)ppGpp synthetase
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KO |
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Organism |
ppar Pectobacterium parmentieri RNS 08-42-1A
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ppar00001]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
A8F97_18980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:ppar03009]
A8F97_18980
Enzymes [BR:ppar01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
A8F97_18980
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
A8F97_18980
Ribosome biogenesis [BR:ppar03009]
Prokaryotic type
Other maturation factors
A8F97_18980
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(4190561..4192660)
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AA seq |
699 aa
MYIFESLNLLIQRYLPEDQIKRLQQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMR
LDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFR
KMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHLKT
ELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLTEAGIACRVSGREKHL
YSIYCKMHLKEQRFHSIMDIYAFRVIVKELDTCYRVLGQVHSLYKPRPGRVKDYIAIPKA
NGYQSLHTSLIGPHGVPVEVQIRTDDMDQMAEMGVAAHWAYKEGESSTTAQVRAQRWMQS
LLELQQSAGSSFEFIESVKSDLFPDEMYVFTPEGRIVELPAGATPVDFAYAVHTDIGHAC
VGARVDRQPYPLSQSLSSGQTVEIITAPGARPNAAWLNFVVSSRARSKIRQMLKNLKRDD
SVSLGRRLLNHALGNGRKLSDIPEKSIQLELERMKLATLDDLMAEVGMGNAMSVVVARNL
LNEQSELGTTGLRKLPIKGADGVMLSFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIR
GYQKEPEKFMAVEWDKVTEQEFIAEIKVDMFNHQGALANLTAAINAANSNIQSINTEERD
GRVYSAFIRLTTLDRVHLANIMRKIRVMPDVIKVNRNRN |
NT seq |
2100 nt +upstreamnt +downstreamnt
ttgtacatttttgaaagccttaatctgctgattcaacgttatctgcccgaagatcagatc
aaacgtttacagcaggcttatctggttgcacgtgatgctcacgaggggcagactcgctcc
agcggtgaaccctatatcacacaccctgttgccgtcgcctgtattctggcggagatgcgt
ctcgattacgaaacgctgatggcagcactgctgcatgatgttatagaggacacccccgcc
acctatcaggacatggaacagctttttggtaaaagcgttgctgaactggtagagggcgtt
tccaagctggacaaactgaagttccgcgataagaaagaagcgcaagctgagaactttcgc
aaaatgatcatggcgatggtgcaagatattcgcgtcatcctgatcaagcttgcagaccgc
acccataacatgcgcacgttgggctcattacgcccggacaaacgccgccgcattgcccgc
gaaacgctggaaatatacagcccgctggcacatcggttgggtattcatcatcttaaaacc
gagttggaagaactgggttttgaggcgttgtatccgaaccgttatcgcgtaattaaagag
gtcgttaaggccgcacgcggtaaccgtaaggaaatgattcagaaaatcctgtcggaaatc
gaagggcggttgactgaagccgggattgcctgccgcgtcagcggtcgcgaaaagcatctg
tactccatctactgcaaaatgcacctgaaagagcagcgttttcactccatcatggatatc
tacgcgtttcgggtcatcgtcaaagagttggacacgtgctatcgcgtactcggtcaggtt
cacagcctgtataaaccacgccctggccgggtgaaagattatatcgctattcccaaagct
aacggctatcaatcactgcatacgtctctgattggcccgcatggcgtgccagtcgaagtg
caaattcgcaccgatgacatggatcaaatggcggaaatgggcgtcgccgcgcattgggcc
tataaagaaggcgagagcagcacgacggcgcaggtacgtgcccaacgctggatgcaaagt
ctactggaactccagcaaagcgccggtagctcattcgaatttatcgaaagcgttaaatcc
gacctcttccctgacgagatgtacgtctttacgccggaaggccgcattgtggaactcccc
gcaggcgcgacgcccgtcgatttcgcctacgcggtacacaccgatatcggccatgcctgc
gtcggtgcacgcgttgaccgtcagccttatccgctgtcacagtcactctccagcggccaa
accgttgaaattattaccgcgccgggtgccaggccgaatgccgcgtggcttaactttgta
gttagctccagagcacgttccaaaatccgtcagatgctgaaaaacctcaaacgtgatgat
tctgtgagcctcggccgccgtttactgaatcacgcattgggcaatggccgcaaactctcc
gatatccctgaaaagtcgattcagttggagcttgagcgcatgaagctcgctacgctggac
gatctgatggcagaagttggtatgggtaatgccatgagcgttgttgtggcgagaaatctg
ctgaacgagcaatctgaactgggaaccaccgggctgcgcaagttgccgatcaaaggcgca
gacggcgtgatgctctcctttgccaaatgctgccgccccatccccggcgatcctatcatt
gcccacgtcagccctggcaaagggctggtgatccaccatgaatcctgtcgcaacattcgc
ggttatcagaaagaaccggaaaaattcatggcggtagaatgggataaggtgacagaacaa
gagttcatcgccgaaattaaagtagatatgttcaaccatcagggcgcactggcgaatctg
acggcagcgatcaacgccgcgaattccaatattcagagcatcaacacggaagagagagac
ggccgcgtatacagtgcctttatccgcctcacaacccttgatcgcgttcatctggctaat
attatgcgtaaaattcgcgtaatgccggatgtcatcaaagttaaccgtaaccgaaattaa |