Pectobacterium parmentieri RNS 08-42-1A: A8F97_21330
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Entry
A8F97_21330 CDS
T04513
Name
(GenBank) transcriptional regulator Crp
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar02020
Two-component system
ppar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A8F97_21330
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A8F97_21330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_21330
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
A8F97_21330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
MarR
HTH_24
HTH_23
Sigma70_r4
MarR_2
HTH_36
HTH_11
HTH_7
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AOR61401
UniProt:
A0A0H3IAV5
LinkDB
All DBs
Position
complement(4706311..4706943)
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ
MANRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEDQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttctcggcaaaccgcagacagacccaactctcgaatggttcctttcccattgtcat
atccacaagtatccatcgaagagcacgctgattcaccaaggtgaaaaagcagaaacgctt
tactacatcgtgaaaggctctgtcgcagtgctaatcaaagatgaagaaggcaaggaaatg
attctttcctacctcaatcagggcgattttattggtgagctaggcctgtttgaagaaggt
caggagcgcagtgcctgggttcgggcaaaaactgcctgtgaagtggctgaaatttcatac
aaaaaattccgtcaactcatccaggttaacccggacatcctcatgcgcctgtctgcgcaa
atggcaaacagacttcaggtgacttcagaaaaagtcggcaacctcgccttccttgatgtg
actggccgtatcgcccaaacattactcaacctggccaaacaacctgatgccatgacacat
ccggatggcatgcaaattaaaattacccgtcaggaaattgggcaaatcgttggctgctcg
cgtgaaaccgtgggccgcattctgaaaatgttagaagaccagaatctgatctctgcacac
ggtaaaacgatcgtcgtttacggcactcgctaa
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