Pectobacterium parmentieri RNS 08-42-1A: A8F97_21990
Help
Entry
A8F97_21990 CDS
T04513
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00330
Arginine and proline metabolism
ppar01100
Metabolic pathways
ppar01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
A8F97_21990
Enzymes [BR:
ppar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
A8F97_21990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
AOR61527
UniProt:
A0A0H3IAC9
LinkDB
All DBs
Position
4831542..4833521
Genome browser
AA seq
659 aa
AA seq
DB search
MSDDMIHHGSSATGKHENLRSMQEVAMNDRNASEMLRTYNIAWWGNNYYDVNELGHISVC
PDPDVPEARVDLARLVKDMQRDNHQRLPALFCFPQILQHRLRSINAAFKQARESFGYEGG
YFLVYPIKVNQHRRVIESLANSGEPLGLEAGSKAELMAVLGHAGMTRTVIVCNGYKDREY
IRLALIGEKLGHKVYLVIEKMSEIRMVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGE
KSKFGLAAVQVLQLVEMLREAGKLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHK
LGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVIT
ESGRAVTAHHTVLVSNIIGVERNEFSEPTEPEEDAPRALESLWSTWKEIKQPGKRRSLRE
WLHDSQMDLHDVHTQYTHGMLDLTQRAKAEQLYLSICQLIQEQLDPSNRAHRPVIDELQE
RMADKLYVNFSLFQSMPDAWGIDQLFPVLPLEGLDKPPERRAVLLDITCDSDGTIDHYVD
GDGIATTMPMPPYDPENPPLLGFFMVGAYQEILGNMHNLFGDTSTVDVFVFQDGTVEIEE
SDEGNTVADMLEYVQLDPKVLMTRFRDQVKETDLDAELQAQFMEEFETGLYGYTYLEDE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacatgattcatcacggctcgtcagcgacgggtaaacatgaaaatttgcgc
tctatgcaggaggttgccatgaatgaccgtaatgccagcgaaatgcttcgtacctacaat
attgcctggtggggcaataattattatgacgtcaatgaacttggccacattagcgtgtgt
ccagaccccgacgtcccagaagcccgtgtcgatctggccagattggtcaaagatatgcag
agagataaccatcagcgcctgcctgcgctgttctgctttccgcaaattcttcagcatcgc
ctgcgttcgattaacgctgcgtttaaacaggcccgcgaatcgtttggctatgaaggcggc
tattttctggtttatccgattaaggttaaccagcatcgtcgcgtcattgagtcattggct
aattctggtgagccgctgggtctggaggcgggttcaaaagctgaactgatggcggtattg
ggccacgcgggtatgacccgtactgtcattgtgtgtaacggttacaaagaccgagaatac
atccgcctggcactgatcggcgaaaagctgggtcacaaggtttatttggtcatcgagaag
atgtccgaaatccggatggtgctggaagaggcggagcgtttgaatgtggtgccgcgcctc
ggcgttcgcgcgcgtctcgcctctcaggggtcgggtaaatggcaatccagcggcggcgaa
aaatccaaatttggtctggcggcggttcaggtgctgcaactggttgagatgctgcgtgag
gctgggaagttggatagcctgcaactgctgcatttccatttgggatcgcaactggcgaat
atccgtgatatcgcgacgggcgtgcgtgaatctgcacgcttctatgtcgagctacacaag
ctgggcgtgaatatccagtgctttgacgttggcggcggtttgggggtggactatgaagga
acccgttcccagtctgactgttcagttaactatggtctgaacgagtacgctaacaacgtg
atttggggtatcggcgacgcctgtaacgagcacgggttaccgcatccgacggttatcacc
gaatccggtcgtgcggtaaccgcacaccataccgtgttggtttccaatattatcggtgtt
gaacgtaacgaattcagcgagcctaccgagccggaagaagatgctccgcgtgcgttggaa
agcctgtggtcaacctggaaagaaatcaagcagccggggaaacgccgttcgctgcgtgag
tggttacatgatagccagatggacttgcatgatgtgcacacccagtacacacacggcatg
ttggacctgacgcagcgtgcaaaagcagagcagctttatctgagcatctgtcagttgatt
caggaacaactggatccgagcaatcgcgcgcatcggccagtgattgatgaattacaggaa
cgcatggctgacaaactgtatgtcaacttctcgctgttccaatctatgccggatgcatgg
ggtatcgatcaactgttcccggtactgccgctggaaggattggataagccgcctgagcgt
cgtgctgtcctgctggatattacctgtgattccgatggcacgatcgatcattatgtcgat
ggcgatgggatcgcgacgacgatgccaatgccgccttacgatccagaaaatccgccgttg
ctgggcttctttatggttggcgcctatcaggaaattctggggaacatgcataacctgttc
ggcgatacgtcgaccgttgacgtatttgtcttccaggatggcaccgttgagattgaagag
tctgacgaagggaatacggttgccgatatgctggaatatgtgcagcttgaccccaaagta
ttgatgacccgtttccgcgatcaggtgaaagaaaccgatcttgatgctgaacttcaggcg
cagttcatggaagagtttgagactgggctgtatggctatacttatttagaagatgaataa
DBGET
integrated database retrieval system
