KEGG   Pectobacterium parmentieri RNS08.42.1A: A8F97_22470
Entry
A8F97_22470       CDS       T04513                                 
Name
(GenBank) LysR family transcriptional regulator
  KO
K18900  LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
ppar  Pectobacterium parmentieri RNS08.42.1A
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppar03000]
    A8F97_22470
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:ppar01504]
    A8F97_22470
Transcription factors [BR:ppar03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    A8F97_22470
Antimicrobial resistance genes [BR:ppar01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump BpeEF-OprC [MD:M00698]
    A8F97_22470
SSDB
Motif
Pfam: LysR_substrate HTH_1 HTH_30 Fe_dep_repress MarR
Other DBs
NCBI-ProteinID: AOR61622
UniProt: A0A8B3FEF0
LinkDB
Position
complement(4941572..4942477)
AA seq 301 aa
MDRFQAMETFIRVVDAGSFKKAAETLHVLPSTVTRSIKELESHLGARLLNRTTRALSITD
VGLRYYDSCKAILRDVHAAESVTAQQKEELQGTIRIGATPSLVKNFLIPALPDFCERHPG
IRLDFHLGDATVDIVQQGIDCVIRTGEPPLSRLVARHLGAFHWTICASPRYLEQHGYPTT
LDSLKDHVAVGYTHSRAGRSVSWGFHDEAHTVAIPLAGQISVNDTDAYLAAGVAGLGLLR
IASYMVRQQLSDGHLVRLLPDLEAPLEPIFILYPQSRHLSPVIRAFIDWCTALIAQEAMK
W
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatcggtttcaggccatggaaacattcattcgtgtggtcgatgcgggtagtttcaaa
aaagcggcggaaaccctgcatgttctgccatccaccgtcacccgcagcattaaagaactc
gaatcacatctcggcgctcggttacttaaccgaacgacgcgagcactcagtattacggat
gttggcctgcgctattacgacagttgcaaagcgatcttacgggatgtgcacgcggcggaa
agcgtaacggcacagcaaaaggaggaactacagggaacgatcagaatcggagcgacacct
tctctggtcaaaaatttccttatcccggcactgcccgacttctgtgaacgtcatcctgga
ataaggctagacttccacctgggtgatgccaccgtggatattgtccagcagggtatcgat
tgtgtcatcagaaccggagaaccaccattatcacgactggtcgcacgacacctcggggcg
ttccattggactatctgcgcttccccacgctatcttgaacaacatggataccccacaacg
ttagactcgctcaaagatcatgtcgcagtgggctatacccacagccgggcaggtcgttca
gttagctgggggtttcacgatgaagctcacaccgtagcaattccgctagcaggacagatc
agcgtaaatgacaccgatgcctatctcgccgctggcgtagcgggtctgggtctactacgc
attgccagctatatggtgcgccagcaactctctgatggacatcttgtccggctgcttcct
gatctcgaagcaccgcttgaacctattttcatcctctacccgcaaagccgccacctctcg
ccggttatccgcgcttttatcgactggtgtaccgcgctaatcgcgcaggaggccatgaaa
tggtaa

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