Pectobacterium parmentieri RNS 08-42-1A: A8F97_22595
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Entry
A8F97_22595 CDS
T04513
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00470
D-Amino acid metabolism
ppar00550
Peptidoglycan biosynthesis
ppar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A8F97_22595 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A8F97_22595 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppar01011
]
A8F97_22595 (murD)
Enzymes [BR:
ppar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
A8F97_22595 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppar01011
]
Precursor biosynthesis
Amino acid ligase
A8F97_22595 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AOR61646
UniProt:
A0A8B3FC36
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All DBs
Position
4970372..4971688
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AA seq
438 aa
AA seq
DB search
MVDYQGKKVVIIGLGLTGLSCVDFFLARGVVPRVVDTRISPPGLDKLPEQVERHLGSLNE
DWLMNADLIVASPGVALATPILCDAANAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMARAAGWQVGVGGNIGLPALQLLEQPAQLYVLELSSFQLETTSSLHAAAATILNV
TEDHTNRYPFGLQQYRAAKLRIYEHADLCVVNADDALTMPIRGADVRCRSFGVDVGDYHL
NRQQGETWLRVNGERVLNTREIKLVGQHNYTNALAALALADAVKIPRASALTALTAFTGL
PHRFQMAFERDGVRWINDSKATNVGSTEAALSGLTVDGTLHLLLGGDGKSADFSPLVPYF
QGERIRLYCFGRDAAQLAALRPEIAEQTETMEQAMRVIAERIKPGDMVLLSPACASLDQF
RSFEQRGDEFARLAKELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggactatcagggtaaaaaagtcgtcattatcgggttgggtctgaccgggctctcc
tgtgttgatttctttctcgcgcgtggtgttgtaccgcgtgtggtggatacccgtatcagt
ccaccgggcttggataagctgccggagcaggtggaacggcatctcggtagcctcaatgaa
gactggctgatgaatgcggatttgatcgtcgccagccccggcgttgcattggcgacgccg
attctgtgtgacgctgctaatgctggtattgagattgttggcgatatcgaactgttctgt
cgtgaagcacaggcacctattgtggcgattaccggttcgaacggcaaaagtacggtgacg
acgttggtcggtgaaatggcgcgcgctgcaggttggcaggtgggcgtcggtggcaacatt
ggtctccctgcgttgcagttgctggaacagcccgctcagctttatgtcctggagttgtcg
agtttccaattggaaacgacgagtagcctgcacgccgctgcggctaccattctgaacgta
acggaagatcacaccaaccgttacccgtttggcctacagcagtatcgtgcagcgaaattg
cggatttatgaacatgcggacctgtgcgttgtgaacgcagacgatgcgttgaccatgccg
attcgcggtgcagatgtgcgctgccgcagttttggtgttgatgtcggtgattatcatctt
aaccgtcagcagggcgaaacctggctgcgggtgaacggtgaacgagtgctcaacacccgt
gaaatcaagcttgtcgggcaacataattacacgaacgcattggcggcgctggcgctggct
gatgctgtgaagatccctcgggcttctgcactgacggcattgacggcatttaccgggcta
ccgcatcgcttccagatggcctttgagcgcgatggagtgcggtggatcaatgattctaaa
gccaccaatgtgggcagcaccgaagcggcattaagcggtttgaccgtcgacggcacgttg
catctgctgttaggtggtgatggaaaatctgccgacttctcgccgctggtgccctatttt
cagggggagcgtattcgtttgtattgctttggtcgtgatgctgcacaactggctgcatta
cgcccggaaattgccgaacagacagaaacaatggaacaggcgatgcgcgtcatcgctgaa
cgcattaagccgggtgacatggtgctgctgtcgccagcttgcgcaagcctggatcagttt
cgtagttttgaacagcgaggcgacgaatttgctcgcttggcgaaggaattaggttga
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