Pectobacterium parvum: LOZ86_00370
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Entry
LOZ86_00370 CDS
T07916
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppav03021
]
LOZ86_00370 (rpoH)
Transcription machinery [BR:
ppav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOZ86_00370 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UFK39416
LinkDB
All DBs
Position
complement(84924..85781)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLEAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKSKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgttgacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcagggcgatctggaggctgctaagcacctgattctgtcacacctgcgtttt
gttattcacgttgcccgtaactattccggctacggcctgccgcaggcggacctgattcag
gaagggaacatcggcctgatgaaagcggtacgtcgctttaaccctgaagttggtgtgcgt
ctggtttctttcgccgtgcattggatcaaagccgaaattcatgaatacgtgctgcgtaac
tggcgtatcgtgaaagtcgcaaccactaaagcacagcgtaagctgttctttaacctgcgt
aagtcgaaaacgcgcctcggctggtttaatcaggatgaagtcgaactggtcgcgcgtgag
cttggtgtgaccagcaaagacgtgcgcgagatggaatcccgcatggcggcgcaggacatg
acgttcgatccgacgccggaagaagattcgcacgacggcaaggcgatgtcgccgatgctt
tacctacaggataaatcgtctgattttgccgatggcattgaagaagataactgggaaacg
catgcggctgataagctcacctacgcgctggaagggctggacgaacgcagccagcacatt
attcgcgcccgctggttggatgatgacaacaaatccaccttgcaggaactggccgatcaa
tacggcgtttccgcagagcgtgtgcgtcagctagaaaagaatgcgatgaaaaaactgcga
gcggcgatagaagcctaa
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integrated database retrieval system
