Pectobacterium parvum: LOZ86_00635
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Entry
LOZ86_00635 CDS
T07916
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00040
Pentose and glucuronate interconversions
ppav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LOZ86_00635
Enzymes [BR:
ppav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
LOZ86_00635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
UFK39466
LinkDB
All DBs
Position
150131..152365
Genome browser
AA seq
744 aa
AA seq
DB search
MKRCSSQKCDSLRKHRSSRLAAVALTNALLFSFSTHAATESTPVWHGIAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLAPGDNADLSAPITIESRGGKIANTHDGLTFFYTQLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGIPRQEPLKEGYEEFPAASNMVMNAIM
TQDKKSHTEIKLQAILRNGVTQPWGNAGAKITKTSYQENVNLEQTPTFRLKLERTNDGFI
TSYAPKGTDNWVSKEVKGADVVTKLDKDHYYVGFFASRNAKITVSNAQLTTTPAQTKASP
EFKAKDYDPLLQVMSSPKTTSEHYVVQARANYDGTIAVSQDGKSLGDAKQVKAGETLSLP
AKIAANGAEFKIAYQPAEGDDKAVKESTFKVERVAYADAKNLYVSPQGSASNDGSKNTPI
DLASAVAALPAGGTIWLNDGDYSATEIPVSASGQQKTVKNLFAVGNKAVIHGLQLKASHW
HVKGIEITEKPFRIEGSYNTIERVLVHHADDTGIQVTSTGDVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNVIRGAFSHNNIDDGFDLFNKIEDGANGVVVIENSIAMN
NTSNGFKMGGEGQPVAHQVKNSIAVGNKLDGFTDNFNPGALIVEDNIALDNERFNFIFRP
SPYSGPEKQGIFKNNVSLKTKAGKYDDAVVGNIDNTNYFIKGDRSVNAQGKEITVNNFVS
VTIPETFTRDAKGNLVLGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcacaaaaatgtgattcattacggaaacaccgttcttcacgcctc
gcagccgtcgcgttgacgaatgcattactctttagctttagtacacacgccgcgacagaa
tcaacccctgtctggcacggcatcgcctttggtcaatcaacagacgtaaacttctcatcc
aatgtcctgccggaaaaaattggcgtcaacgacgtcaccattaacggtaagaaattagcg
ccgggggataacgctgatttgtccgcccctatcacgatcgaaagtcgtggcggaaagatt
gccaacacccatgacgggctgacgttcttctatacacagctgcctgcaaatgtgaatttt
acgcttcagtctgatattaccgtggaacagtttgggccagaaaacggcgccaagcctgct
gctcaggaaggggcggggattctggtgcgcgatattattggcataccgcgtcaggaaccg
ctgaaagaagggtatgaggaattccctgcggcatccaacatggtgatgaacgccatcatg
acgcaggataaaaagtctcataccgaaatcaaactacaggcgattttgcgtaatggcgtc
acgcaaccgtggggcaacgcgggcgcgaaaattaccaaaaccagctaccaggaaaatgtg
aatctggagcaaacgccgacgttccgtctgaaactggaacgcaccaacgatggcttcatt
acctcttatgcgccgaaaggcactgacaactgggtatcaaaagaagtcaaaggtgcggac
gtcgtcaccaagctggataaagaccattactacgtcggtttctttgcttcccgtaacgcc
aaaatcaccgtcagcaatgcacagttgaccacgacgccagcgcaaaccaaggcctcaccg
gagtttaaagccaaggattatgatcctttgcttcaggtgatgtcatcgcctaaaaccacc
agcgagcactatgtggttcaggcaagagccaattacgatggcacgatcgcggtttcgcaa
gacggtaaatctctgggtgatgcgaagcaggtaaaagcgggagaaaccttatctctgcca
gcgaaaattgccgctaacggtgctgagttcaaaattgcctaccagcctgcggaaggcgat
gataaagccgtaaaagagagcacgttcaaggttgaaagagtggcctacgcagacgctaaa
aatctgtatgtttcaccacaaggttcagccagcaatgacggcagtaaaaatacaccgatc
gatttagccagcgccgtcgccgctctgccagctggtggcacaatctggctcaacgatggt
gattacagcgcaactgaaatccctgtcagcgccagcggtcagcaaaaaaccgttaagaac
ctgtttgctgtcggcaataaagccgtgattcatggcctacagctgaaagcgagccattgg
catgttaaagggattgaaatcacagagaaaccgttccgtatcgaaggaagctacaacacc
atcgaacgcgttctagtgcaccacgctgacgataccggtattcaggtgacctcgactggt
gatgtgggtagaccactgtgggccagccataacctgattctgaattcagaatctcacagc
aatcaggacccaggtaaaattaacgccgacggcttcgcggtgaaaatgcgtgtgggtgaa
ggcaacgtgattcgcggcgcgttctcgcacaacaacatcgatgacggctttgacctgttt
aacaaaattgaagacggcgcaaacggcgttgtggtgatcgagaattcaattgccatgaac
aacaccagcaacggcttcaaaatgggtggcgaaggccagccagtggcgcatcaggtcaaa
aatagcattgctgtgggcaacaaacttgatggtttcactgacaacttcaaccctggtgca
ttgatcgttgaagacaacattgcgttagataacgaacgctttaacttcattttccgtcca
agcccttactctggcccggaaaaacaaggcatcttcaagaacaacgtttcgctgaaaacc
aaagcgggtaaatatgatgatgcggttgtcggcaatatcgataacaccaactatttcatc
aaaggcgaccgttcggttaacgcgcaaggtaaggaaatcaccgtaaataatttcgtgtca
gtaaccatccctgagacgtttacgcgtgacgccaaaggcaatctggtacttggcgacttc
ctgaagaaaaaatga
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