Pectobacterium parvum: LOZ86_01140
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Entry
LOZ86_01140 CDS
T07916
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ppav
Pectobacterium parvum
Pathway
ppav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOZ86_01140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_01140
Transporters [BR:
ppav02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LOZ86_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_16
AAA_29
nSTAND3
AAA
AAA_25
AAA_33
AAA_24
PRK
MobB
NACHT
AAA_23
SRP54
TsaE
Zeta_toxin
AAA_30
SbcC_Walker_B
TrwB_AAD_bind
AAA_17
DUF87
AAA_19
APS_kinase
NB-ARC
ATP-synt_ab
NTPase_1
CbiA
C_Hendra
Motif
Other DBs
NCBI-ProteinID:
UFK39556
LinkDB
All DBs
Position
complement(263509..265170)
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AA seq
553 aa
AA seq
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MSLSASLQTSAAVPVLALENVTIAYRSDDREQTVVEGVSFHIQPGEVVALVGESGSGKTT
TAQAVIGLLAENGRLTRGTIRLNGVDISGWSQKRLDSVRGAQISLIPQDPTSSLNPVQTI
GEQVDEILRIHQREDRQTTRQKTLALLERVGLNQPELRAKQYPHELSGGMKQRVLIAIAI
ALKPALIIADEPTSALDVTVQKRILDLLDELRRENGTAVLFVTHDLGVAAERADRLLVFQ
NGYIQEQGPTLEVLSAPSSHYARTLLANVPSLNSNPRPHRANASVPDIIVSVENLVQTFP
LSGRKGEHFRAVDDVSFSVARGTTHAIVGESGSGKTTTARSLLGFHHPSAGRILIDGTDI
THLKGEALRQFRQKIQLVYQNPFSSLDPSQRLYDIVEEPLRNFNRHTAAQRERKIHEMFE
RVALPVALLSRKPRELSGGQRQRVAIARALVLEPQVLVLDEAVSALDVTVQAQILRLLAE
LQESLGLTYLFISHDLAVVRQIADTVSVLYHGKQLESGPVEQIFAQPEHRYTRELIEAIP
GQQHPAFARSHSH
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcagccagcttacaaaccagcgcagccgtgcccgtgctagctctggagaat
gtcacgattgcctatcgcagcgatgaccgcgagcagaccgtggtcgaaggcgtctctttc
catattcagcccggtgaagtggtggcgctggtgggggaatccggttcagggaagacgacc
actgcgcaggccgtcatcggtttactcgccgagaacggtaggctcacgcgcggtaccatt
cggctaaacggcgtagatatcagcggctggtcacagaagcgattggatagcgtgcgcggt
gcacagatcagcctgatcccacaagatcccactagctccctgaatccggtgcaaaccatc
ggcgagcaggtggacgagattctgcgtattcatcagcgggaagatcgccagacgacccgc
cagaaaacgctggcgctgctggagcgcgtgggactaaaccagccggagctgcgggcgaag
cagtatccgcacgagctgtccggcggcatgaaacaacgcgtcctgatcgcaattgcgatt
gcgctaaaacccgcgctgattattgccgatgagcccaccagcgcgctggatgtcacggtg
cagaaacgtattctcgatctgcttgatgaactgcggcgcgaaaatggcacggcggtgcta
ttcgtcacgcacgatctgggggtggcggccgaacgcgccgatcggctgctggttttccag
aacggctacattcaggaacagggcccaacgcttgaggtgctcagcgcgccctcaagccac
tatgcccgtacgctgctggcgaatgttccgtcgctcaactccaacccgcgaccacatcgt
gccaatgcatcggttcctgacattattgtctcggtcgaaaatctggtgcagacctttccc
ttgtcgggccgtaaaggggaacattttcgggctgtggatgatgtctctttcagcgtggcg
cgcggcacaacgcacgccattgttggcgagtccggttccggtaaaaccaccacggcgcgt
agcctgctcgggttccatcatcctagtgcggggcgcattctgatcgacggcaccgatatc
acgcatctgaaaggtgaagcgttgcgtcagttccggcaaaaaatccaactggtctatcaa
aacccttttagctcgctcgatccgtcacagcggttatacgacatcgtcgaggaaccgctg
cgcaattttaatcgccataccgccgcgcagcgggagcgaaaaattcatgagatgttcgag
cgcgttgccctgccagtcgcgctgctgtcacgcaagccgcgtgaactgtctggcggccaa
cgccagcgtgtcgctatcgcccgcgcgctagtgctggaacctcaggtgctggtgctggac
gaagccgtctcggcgctggacgtcaccgtacaagcgcagattctgcgtttgctggccgag
ctacaggaatcactcgggctgacatacctgttcatttcgcacgatttagcggtggtacgc
caaatcgccgacaccgtttccgtgctgtaccacggcaagcagcttgaatccggcccagtg
gagcagatcttcgcccaacccgaacatcgctacacccgtgaactcatcgaggccatccct
gggcagcaacacccagcttttgcccgctcacattcacactga
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