Pectobacterium parvum: LOZ86_01575
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Entry
LOZ86_01575 CDS
T07916
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOZ86_01575 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_01575 (mutM)
Enzymes [BR:
ppav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LOZ86_01575 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LOZ86_01575 (mutM)
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOZ86_01575 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
CpgS_N
Motif
Other DBs
NCBI-ProteinID:
UFK39628
LinkDB
All DBs
Position
353194..354003
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGISPYLVGHTILYAEVRNTRLRWPVSAEVLSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYSEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNP
ETCSVLAHLGPEPLEAEFSADYLYHASRGKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRTAGSLNENEAAILVSVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRN
GEPCRTCGTLIETAKHGQRSTFFCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggttgaaaccagtcgtcggggtatttccccttatctcgttggt
cacaccatcctttatgcggaagtgaggaacacgcgcctgcgctggccggtatccgctgag
gttctctcgctgagcgatgaacccgttctcagcgtgcgtcggcgggcaaaatatctgctg
attgagttgactcgcggctggattattgtgcatctcggcatgtctggcagcctgcgggtg
ttgccggaatatagcgaaccggagaaacacgatcatgttgatttggtgatggatagcggt
aaggtgctgcgttataccgatcctcggcgttttggtgcctggctgtggacggataaccct
gaaacctgctcggtattggcgcatctcgggccagaaccgttagaggcggaattctcagca
gattatctttatcatgcttcacgcggtaaaaagacagcaatcaaacagtggattatggat
aacaaagtcgtcgtcggcgtaggtaatatttacgcgagcgaatcgctgtttgctgcgggt
atccatcctgacagaacggctggatcgttaaatgaaaacgaggcagccatattggtgagc
gtgattaaacaggtgctacagctttcgattgagcaggggggcacgacgctgcgtgacttt
ttgcaatcagatggcaaacccggttatttcgcgcaggagctgcgagtctatggccgcaac
ggtgaaccttgtcggacatgcggaacgctgatagaaaccgcaaaacacgggcagcgcagc
acgtttttctgtcgccgctgtcagaagtaa
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