Pectobacterium parvum: LOZ86_01650
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Entry
LOZ86_01650 CDS
T07916
Symbol
rfaQ
Name
(GenBank) lipopolysaccharide core heptosyltransferase RfaQ
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00540
Lipopolysaccharide biosynthesis
ppav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LOZ86_01650 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppav01005
]
LOZ86_01650 (rfaQ)
Enzymes [BR:
ppav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
LOZ86_01650 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
ppav01005
]
Core region
LOZ86_01650 (rfaQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Ephrin_lbd
Motif
Other DBs
NCBI-ProteinID:
UFK39643
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All DBs
Position
complement(368707..369780)
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AA seq
357 aa
AA seq
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MSQRIISYHRILVVKLRYHGDMLLTTPLISTLKANYPDAKIDVLLYQDTMPILSANPEIH
QLYVLKRKTGTLLEKIRNFQEVRRELKHNNYDLIVNLADQWPIALLVKSLGCRSIALDRG
DTLKGKMWRSLFSTCVSARGTHIVEQNRSVLSPLNLQPTAQKDRMSLYYREEDADRMFSI
SPQLREQAYIVIQPTARQSFKCWDNDKFSTVIDDLKVRGLEVVLTCGPSQDDLHVIQDIH
ALCKHKPNITFAGKTSFLELAALIDRAKLYLGVDSAPMHMAAALNTPLVCLFGPTDHKKW
RPWSDNSIVIWAGDYQPMPERKNLDRNQKYLSCIPAQEVIQAVNSLLADRSTNEEVQ
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaacgcatcatctcttatcaccggattctcgtggtgaagctcagatatcatggc
gatatgctgctgaccactccgctcatcagtacgctgaaagccaactaccctgatgccaaa
atcgacgtattgctgtaccaggatacgatgccgattctctctgcaaacccagagatacat
cagctctatgtgctcaaaagaaaaacgggcacgcttttggaaaagatccgtaatttccaa
gaagtcaggcgagagcttaagcacaacaattacgatctgatcgtcaatttagctgaccag
tggcccattgccctattagtaaaatcattggggtgccgcagtattgctctcgatcggggc
gatacattgaaaggaaaaatgtggcgctcgcttttcagcacctgcgtttcagcaaggggc
acgcatattgttgagcaaaaccgctccgtgctttctcctctcaacttacaaccgaccgcg
caaaaagatcgcatgtcgctgtattacagagaggaagatgccgaccgtatgttcagcatc
tctccacagctacgcgagcaagcttatattgtcatccagcctacggcgagacagtctttt
aaatgctgggataatgataaattttcgaccgtcattgacgacctgaaagtaagaggcctc
gaagtggtactgacctgcggcccgtctcaggacgatcttcatgttattcaagatatccat
gctctatgcaaacacaaaccgaatataacctttgcaggtaaaacgagttttctggaactc
gccgcattaatcgatagagccaaactttatctcggcgtcgactctgcgccgatgcacatg
gccgccgcgctcaatacgccgttagtctgcttatttggaccgacagatcataaaaaatgg
cgaccctggtctgacaacagtatcgttatttgggctggggactatcaaccgatgccggaa
agaaaaaatctcgataggaaccaaaaatatctttcctgcatccctgcacaagaggtcatt
caagcggtaaatagcctattggcagatcgttcgacaaacgaggaagtgcaatga
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