Pectobacterium parvum: LOZ86_02430
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Entry
LOZ86_02430 CDS
T07916
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav03420
Nucleotide excision repair
ppav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOZ86_02430 (uvrD)
03430 Mismatch repair
LOZ86_02430 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_02430 (uvrD)
Enzymes [BR:
ppav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOZ86_02430 (uvrD)
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOZ86_02430 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LOZ86_02430 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
UFK39774
LinkDB
All DBs
Position
544644..546806
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIHMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGAEGEPISLYCAFNELDEARYVVNRIKAWQENGGALSDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALSYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRALLQEKVLAGRAAASLQRFIELIDALAYETSELPLHIQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEVNHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPMTQNDSGYKLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgatggcctcaacgacaaacagcgtgacgcggtagccgcg
ccgcgcagcaatttattggtgctggcgggcgcaggcagcggcaaaacgcgggttctggtt
catcgtattgcctggcttttgtccgtcgaaaactgttcgccgtactccatcatggcggtg
acgttcaccaacaaagcggcggcggagatgcgccaccgtatcgaccacctgatcggcacc
agccagggcggcatgtggattggcactttccacgggctggcacaccgcctgctgcgtgcg
caccatatggatgccaatctgccgcaggatttccagattctggacagcgaagatcagctg
cgtctgctgaagcgcctgattcgggcgctcaatctggatgagaaacagtggccgccgcgt
caggcgatgtggttcatcaacggtaagaaagatgaaggcctgcgcccgcagcacattgaa
agctacggcaaccctatcgaacaaacgtggcaacgcgtgtatcaggcctatcaggaagcg
tgcgatcgcgctgggctggtggatttcgccgaactgctgctgcgcgcacacgaattgtgg
ctgaacaagccgcatgtgctgaaccactatcgcgaacgttttaccaatattctggtggac
gaatttcaggatactaaccgcattcagtacgcttggatccatatgctggcgggcgacagc
gccaaggtgatgattgttggggatgacgatcagtcgatttacggctggcgcggggcgcag
gtcgaaaatattcagctgttcctgaaagatttcgccggcgcagaaacgatccggctggag
cagaactatcgctcgaccagcaatatcctgaaagcggcgaatgcgctgattgcccacaac
ggcgggcgactcggcaagaatctgtggaccgatggcgcagaaggtgaacccatttcgctg
tattgcgcgttcaacgaactggatgaggcacgttacgtcgtcaaccggattaaagcctgg
caggaaaatggcggggcgctgagtgataacgccattctgtatcggagcaacgcgcagtcg
cgtgtgctggaagaggcgctgttgcagcagagtatgccgtaccgcatctatggcggaatg
cgcttcttcgaacgtcaggaaattaaagatgcgctgtcttatctgcgcctgatctctaat
cgtaacgatgatgcggcgttcgaacgtgtggtgaatacgccgacgcgcggcatcggtgat
cgtactctggacgtggtgcgccagacggcgcgcgatcgtcagctgacgctgtggcaatcc
acgcgggcgctattgcaggagaaagtgctggctggacgggcggcggcatcgcttcagcgc
tttatcgaactgatcgatgcgttggcctatgaaacctctgagctgccgctgcatattcaa
accgaccgggcgattaaagattccggcctgtggagcatgtacgagcaggaaaaaggcgag
aaagggcaggcacgagtagaaaacctggaagaactggtgacggctacgcgccagttcagc
tatcaggaagaagatcaggatttgatgccgcttcaggccttcctgtcgcatgccgcactg
gaagcaggcgaaggtcaggcggatgccaatcaggacgcagtgcagctcatgacgctgcac
tcggcgaaagggctggagttcccgcaggtctttatcgtcggtatggaagaaggtatgttc
cctagccagatgtcgctggatgaaggcgggcgtctggaagaagagcgtcgtctggcttat
gtcggcgtcacacgtgcgatggaaaaactgacgataacctacgcggaatcccgccgttta
tacggcaaagaagtgaatcaccgaccttcccgattcgtcggcgaactgcctgaagagtgt
gttgaagaagtacggttgcgcgccagcgtctcccgtccggtcaatcaccagcgccttggc
acaccgatgacgcaaaacgacagcggctacaaattagggcagcgggtccgccatgcgaaa
ttcggcgaaggcacgatcgtgaatttggaaggcagcggcgatcacgcccgccttcaggtc
gcgtttcaagggcagggcattaaatggctggtcgccgcttatgctcggctggaaacagtg
taa
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