Pectobacterium parvum: LOZ86_02980
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Entry
LOZ86_02980 CDS
T07916
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00910
Nitrogen metabolism
ppav01100
Metabolic pathways
ppav01120
Microbial metabolism in diverse environments
ppav01310
Nitrogen cycle
Module
ppav_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LOZ86_02980 (nirB)
Enzymes [BR:
ppav01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
LOZ86_02980 (nirB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer2_BFD
NIR_SIR
Pyr_redox
NIR_SIR_ferr
Rubredoxin_C
Pyr_redox_3
FAD_binding_2
GIDA
FAD_binding_3
AlaDh_PNT_C
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
UFK39878
LinkDB
All DBs
Position
complement(678595..681147)
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AA seq
850 aa
AA seq
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MNKVRLAVIGNGMVGHRFIEELLDKAPTSTYDITVFCEEPRVAYDRVHLSSYFAHHTVEE
LSLVREGYYEKNGVKVLLGERAITINRSEKAIHSNSGRTVYYDKLIMATGSYPWIPSIKG
SNGQDCFVYRTIEDLNAIENCARRSKRGAVIGGGLLGLEAAGALKHLGVETHVIEFAPVL
MAEQLDAQGGALLQRKIENMGVRVHTSKNTQAIQHSGLENRKTMVFADGSTLEVDFIVFS
TGIRAQDKLARQCALEIGPRGGIAINDWCQTSDPDVYAIGECAAWHGRPFGLVAPGYKMA
QVAVDHLLGHENRFQGADMSAKLKLMGVDVGGIGDAHGHTLGSRSYMWLDENKETYKRLI
VSADNKTLLGAVLVGDTRDYGNLLQFMLNKIPLPDSPEALILPASAGSAKPTLGVDALPE
SAQICSCFDVSKGDIIKAINGGCHTVAALKETTKAGTGCGGCIPLLTQVLNSELSKQGIE
VNNHLCEHFAYSRQELYHLIQIEKIKTFDQLLEKHGSGYGCEVCKPTVASLLASCWNEYV
LKPQHTPLQDSNDNFLGNIQKDGTYSVIPRSAGGEITPDGLIAIGRIAKQYNLYTKMTGS
QRMALFGVQKGDLPDVWAQLIEAGFETGHAYAKALRMAKTCVGSTWCRFGVGDSVGFGVE
LENRYKGIRTPHKMKFGVSGCTRECAEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLL
AADLDRETVIRYLDRFMMFYIRTADKLQRTSVWLDNLEGGIDYLRNVIVKDKLSINDQLE
ADIARLREGYLCEWQATLEDPDAQKRFAHFINSPERDPNVQMVGERQQHRPARPAERIPV
KQIELEEENA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtcagactcgctgttatcggtaacgggatggttggccaccgttttatcgaa
gagttgctggataaggccccgacatccacctacgatattaccgttttttgtgaagaaccc
cgcgtcgcctacgatcgtgtccacctctcttcttacttcgcgcaccacacggtagaagag
ctctctttagtacgcgaaggctactacgaaaaaaatggcgttaaagtcctgctcggtgaa
cgcgccatcaccatcaaccgcagtgaaaaagccattcactccaattccggccgtaccgtg
tattacgacaagttaatcatggcaaccggctcttatccgtggatcccgtcaatcaaagga
tcaaacgggcaagactgtttcgtctaccgcaccattgaagatctaaacgccatcgaaaac
tgcgcacgccgtagcaaacgcggcgcggtgatcggcgggggtctattaggtctggaagcc
gctggcgcactgaaacaccttggcgtggaaacgcacgttattgagttcgcgcccgtgctc
atggccgaacagctggatgcacagggcggcgccctgctacaacgcaagattgaaaacatg
ggtgtgcgtgtgcacaccagcaagaatacgcaggccattcagcattccggtctggaaaac
cgcaagacgatggtgtttgccgacggcagcacgctggaagtcgactttatcgtgttctct
accggtatccgcgcacaggacaaactggcgcgtcagtgtgcgctggaaatcggcccacgc
ggcggtatcgcgattaacgactggtgccagacctccgacccggacgtctatgctatcggc
gaatgtgccgcctggcatggccgaccatttggtctggtcgcccccggctacaagatggcg
caggttgccgtcgaccacctgttagggcatgaaaaccgattccagggtgccgacatgagc
gccaagctcaagctgatgggcgtcgatgtcggcgggattggcgacgcacacggccatacg
ctgggctctcgcagctacatgtggctggatgaaaataaagaaacctacaaacgcttgatc
gtcagcgccgacaataaaacgctgctcggtgccgtactggtcggcgacacgcgggattac
ggcaacctgctgcaattcatgctgaacaaaatcccgctgccggattcccctgaagcgctg
attcttcctgcgtccgctggcagtgcgaaaccgacgctgggtgtcgatgctctgccggaa
agtgcacaaatctgctcctgcttcgacgtgtccaaaggcgacatcatcaaagcgattaac
ggcggctgtcacactgtcgcggcgcttaaggaaaccaccaaagccggtacgggctgcggc
ggctgcatcccgctgcttacgcaggtgttaaattcagaactcagcaaacaggggatcgaa
gtcaataatcacctgtgtgagcacttcgcctattcgcgtcaggagctgtaccacctgatc
caaatcgaaaaaattaaaacgttcgatcaactgctggagaaacacggttcaggctacggc
tgtgaggtctgtaaaccgaccgtggcgtccctgctggcgtcctgctggaacgagtacgtg
ctcaaaccgcagcacacgccattgcaggattccaacgataacttcctcggcaatatccag
aaagacggcacttactccgtgatcccacgctccgcaggcggggaaatcacgccggatggc
ctgatcgccattggtcgcatcgcgaagcaatataacctgtacaccaaaatgaccggctct
cagcgcatggcgctattcggcgtacagaaaggcgacctgcctgacgtgtgggctcagctc
atcgaagctggatttgaaaccggccacgcttacgccaaagcattacgtatggcaaaaacc
tgcgtcggcagcacctggtgccgctttggcgtcggcgacagcgtgggctttggcgtcgag
ctggaaaaccgatacaaaggcatccgcaccccgcacaaaatgaaatttggcgtctccggc
tgtacgcgggaatgtgcagaagcacagggtaaagacgtggggattatcgccaccgaaaaa
ggctggaacctctatgtatgcggcaacggcgggatgaagccgcgccacgccgacctgctg
gcagccgacttagaccgcgaaacggtcatccgctatctggaccgcttcatgatgttctac
atccgcacggccgataagctccagcgtacgtccgtctggctggataatctcgaaggcggc
atcgactatctgcgcaatgtgattgtgaaagacaaactgagtattaacgatcagcttgaa
gccgatatcgcacgtctgcgggaaggttacctctgcgaatggcaggcgacgctggaagat
ccagacgcacagaaacgctttgcccacttcattaacagcccagagcgtgacccgaatgtg
caaatggtgggtgaacgtcaacaacaccgtccggcgcgccctgccgagcgcattccggtg
aaacagattgagttagaggaggaaaacgcatga
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