Pectobacterium parvum: LOZ86_03395
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Entry
LOZ86_03395 CDS
T07916
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppav03009
]
LOZ86_03395 (rsmB)
Enzymes [BR:
ppav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LOZ86_03395 (rsmB)
Ribosome biogenesis [BR:
ppav03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LOZ86_03395 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_25
Methyltransf_37
MTS
Cons_hypoth95
Methyltransf_5
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
UFK39948
LinkDB
All DBs
Position
complement(745079..746368)
Genome browser
AA seq
429 aa
AA seq
DB search
MKSSYNLRSIAAKVVGQVLDQGQSLSALLPVHQREVSDKDRALLQELCFGVLRVLPQLEW
CIQQLMAKPLTGKQRTLHYLIMVGIYQLHYTRIPPHAALAETVEGAVALKRPQLKGLING
VLRQFQRQQEELIQREATHSSHYQHPSWLLARIEHAYPNRWQNIVEANNQRPPMWLRVNR
LHHSREAYLNLLEQEGIEAFPHAEYSDAIRLAAPCAVDQLPGFSQGWATVQDASAQGCAY
WLDPQDGEQILDLCAAPGGKTTHILEAAPKSHVLAVDVDETRLGRVKENLLRLQMHAEVK
QGDGRYPDSWCEGRVFDRILLDAPCSATGVIRRHPDIKWLRRDRDIEELVALQKEILDAI
WPHLKTGGTMVYATCSILPEENAQQVADFLTRHTDATLVDTGTREIPGIQMLPYPDGGDG
FFYAKLVKN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctcatacaatctacgcagtattgccgcaaaagtggtgggacaggttctggat
cagggacaatcactcagtgccttattacctgttcatcagcgtgaagtctccgataaagat
cgcgcacttttgcaggagctttgcttcggcgtattacgcgttttaccgcagttggaatgg
tgtattcaacaactgatggctaagcccctgacgggcaaacaacgcacgctgcactacctc
atcatggtcggcatctaccagctacattacactcggatcccgccacatgcggccctggca
gaaacagtagaaggtgctgtcgcattaaagcggccacagctcaaggggctgattaatggc
gtattacgccaatttcagcgtcaacaggaagaactgattcaacgtgaggcaactcactca
tctcactaccagcacccaagctggctgctggctcgcatcgagcatgcctatccaaatcgc
tggcaaaacatcgttgaggcgaataatcaacgccctccaatgtggctacgtgtgaatcgg
ttacaccactcacgtgaagcgtatttaaacttgttagaacaagagggaattgaagcattt
cctcatgctgaatacagcgatgcgatacgacttgcggctccctgtgcagtcgatcaattg
ccaggattttcacaagggtgggcaacggtacaggatgcatcggctcaaggctgcgcctat
tggctcgatccacaagatggtgaacagatcctcgatctctgtgctgcacccggtggaaaa
acaacacacattttagaagcagcaccaaaatctcatgtactcgctgtcgatgttgatgaa
acacgtttaggccgggtaaaagaaaatttactgcggctacaaatgcatgccgaagtaaaa
caaggcgatggacgttatcctgattcatggtgtgaaggacgtgtgtttgatcgcattctg
ttggatgccccttgctcagccactggtgtcattcgtcgtcatcctgatattaagtggttg
cgacgagacagagacatcgaggagttagtggcattgcaaaaagaaattcttgatgcaatt
tggccacatctcaaaacaggcggcacgatggtctacgctacctgctctattctgccggaa
gaaaatgcccaacaagttgctgatttcctgactcgccataccgatgcaacgcttgttgat
acaggaacaagagaaataccgggcatacagatgcttccctatcccgatggtggcgatggt
ttcttttatgcgaagctggtaaaaaactga
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