Pectobacterium parvum: LOZ86_03510
Help
Entry
LOZ86_03510 CDS
T07916
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_03510
Transporters [BR:
ppav02000
]
Other transporters
Pores ion channels [TC:
1
]
LOZ86_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
TrbC_Ftype
PA_decarbox
Bac_rhamnosid_N
Motif
Other DBs
NCBI-ProteinID:
UFK39964
LinkDB
All DBs
Position
771521..773629
Genome browser
AA seq
702 aa
AA seq
DB search
MFRKTRLALVVGCFTSGLTVPALAQDTPSSSSQGDTLVVTSQTQRGATKLETPDIETPQA
VSIITRDQIQEQGATSVRQAVGYTPGVYNNQIGASNRFDYMVLRGFSDGSLDNVYLDGLK
MMGDTNSHSSLVIDPWFLDSIEVVRGPASVLYGRSSPGGIVALNSRQPSFDRSGQIKLFA
GNNAQRGAAFDVTGPLNDDERFAFRLGGMVREADTQFGPLKEERYAIAPSLLWRISDKTR
LELMAYLQRDPEGGSHSGLPYEGTVVAHNGRKISNTFYEGEENYEKYDRRQNMVGYNVEH
GFDSGWAVRQKVRYLRTKVHLDQVYAYGWTQPTADTLTRYYSGSRESLSALTLDNQLDGS
VDTGAVNHRLLVGIDYQQRHNDVDWPSGSFPALDAFNPVYGSGPTAMSGTLEKHKLQQTG
IYLQDQMSWERWRLTLGGRHDQVKITTINKNSGDRGELDENNFSSRAALLYLFDNGFAPY
VSYSTAFTPTSFADASGNILEPMKGKQWEAGMKYQPEGSQNQYSLSVFRINQKNVATKNQ
PSDPYRSIGEIESEGVELEAVSHITENLRLQAAYTYTDIRYKKSDDVNEQGRRAVYAPRN
QASAWASYDVKSGPLDGLTIGSGVRYVNGVTSDRANTHTLPSYTLVDMAVGYDLSKVGLK
GLSAQLNVNNLTDKRYVAACNSLEFCYFGAERSVVGSISYSF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaaaacgcggctggcgctggtggttggctgtttcaccagtggattaacagtg
ccggcactggcgcaggatacgccatcctcttcttctcagggcgatacgttagtcgtgacg
tctcaaacgcaacgcggcgcgactaagctggaaacgcccgatatcgagactcctcaggcc
gtttctatcattacgcgcgaccagattcaggaacagggtgcgaccagcgttcgtcaggcg
gtcggctatacgccgggcgtgtacaacaaccaaatcggcgcgtccaaccgctttgactac
atggtgctgcgcggcttttccgacggcagcctcgataacgtctatctcgacgggctgaag
atgatgggggataccaactcccatagctcgctggttatcgatccctggttcctcgacagc
attgaagtggtcagaggccccgcatccgtactctatggccgttcttctccgggggggatt
gtggcgctgaattcccgtcagccgtcgttcgatcgcagcggacagatcaaactgtttgca
ggcaataatgcgcagcgcggtgcggcgtttgacgttaccggtccgctgaatgatgacgaa
cgttttgcgttccgtctgggcgggatggttcgtgaggcggatacccaatttgggccactg
aaagaagaacgctatgcgattgcacctagtctgctgtggcgaatttccgacaagacccgt
ctggagttgatggcgtacctgcaacgcgatcctgaaggcggcagtcactcgggtttgccg
tatgaaggtacggtggtcgcgcacaacgggcggaaaatctcgaacaccttctatgaaggg
gaagagaactatgagaaatacgaccgtaggcaaaacatggtgggatacaacgttgagcat
ggttttgatagcggctgggcagtgcgccaaaaagtgcgttatctgcgtaccaaagtgcat
ttggatcaggtgtacgcctatggctggacgcagccgaccgctgatacgttgacccgctat
tactccggttcccgcgagtcgctgtctgcgctaacgttagataatcagctcgatggcagc
gtggataccggtgcggtgaaccaccgtctgctggtggggattgattatcaacaacgtcat
aatgatgtggattggccttcgggttccttcccggcgctcgacgcgtttaatcccgtttac
ggttccggtccaacggccatgtccggcacgctggaaaaacacaagctgcaacagacgggg
atctatctacaagatcaaatgagctgggagcgttggcgtttaacgttgggcggtcgtcac
gatcaggtaaaaatcaccactatcaataaaaatagcggtgaccgtggtgagctggatgag
aataattttagctcacgtgccgcattgctctacctgtttgataatggctttgcgccttat
gtgagctattccacggccttcacgccaaccagctttgctgatgcgagtggcaacatcctt
gaaccgatgaaaggaaaacagtgggaagcgggcatgaagtatcagccggaaggatcgcaa
aaccagtatagcctgtcagtattccgtattaatcagaaaaatgtcgcgacgaagaatcag
cccagcgatccgtatcgttccattggtgaaatcgaatcggaaggcgtggagctggaggct
gtgagtcatatcaccgaaaaccttcgtttgcaggcggcctatacctatacggatatccgc
tataagaagagtgatgatgtgaatgaacaaggcagacgtgcggtctacgcaccgcgtaat
caggctagcgcctgggctagctatgatgtcaaaagcggtccgctggacggcctgacgatt
ggctccggcgtgcgttacgtgaacggcgtgacctccgatcgcgccaacacccacacgctg
ccttcttatacgctggtggatatggcggtgggatacgatctctcgaaggtcggtctgaaa
gggctgagtgcacagcttaacgtcaacaacctgaccgataaacgctacgtagcggcctgt
aactcgctggagttctgctatttcggtgcggagcgcagcgtggtcggtagcatctcttat
tcgttctga
DBGET
integrated database retrieval system
