Pectobacterium parvum: LOZ86_04060
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Entry
LOZ86_04060 CDS
T07916
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00260
Glycine, serine and threonine metabolism
ppav00630
Glyoxylate and dicarboxylate metabolism
ppav00670
One carbon pool by folate
ppav00785
Lipoic acid metabolism
ppav01100
Metabolic pathways
ppav01110
Biosynthesis of secondary metabolites
ppav01200
Carbon metabolism
Module
ppav_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOZ86_04060 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOZ86_04060 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LOZ86_04060 (gcvP)
00670 One carbon pool by folate
LOZ86_04060 (gcvP)
Enzymes [BR:
ppav01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LOZ86_04060 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
UFK40059
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Position
893868..896759
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AA seq
963 aa
AA seq
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MTQTLSQLEHDGAFIERHIGPSVSQQQHMLSVVGATSLDALIRQIVPVDIQLPSPPAVGE
AVTEHEALAELKAIAGRNQCYKSYIGMGYSAVLMPPVILRNVLENPGWYTAYTPYQPEVS
QGRLEALLNFQQVTQDLTGLDLASASLLDEATAAAEAMAMAKRISKLKQAERFFVADDVH
PQTLDVVRTRAETFGFEIVIGKVEEALKDDAVFGVLLQQAGTTGELHDYSDLMAALKARK
VVSCVASDIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFACRDEHKRAMPGR
IIGVSRDATGNTALRMAMQTREQHIRREKANSNICTSQVLLANIAGMYAVFHGPEGLKRI
AGRIHRLTDILAAGLTQGGLLLRHRSWFDTLTIEVADKDAVLSRALSFGINLRSDLASAV
GITLDEATTREDVLALFAVLLGDDHGLDIDALDAAIGQKAATIPAGLVRHDAILSHPVFN
RYHSETEMMRYLHRLARKDLALNQAMIPLGSCTMKLNAAAEMLPITWPEFAELHPFCPTE
QALGYRQMIEQLSGWLVQLTGYDAICMQPNSGAQGEYAGLLAIRRYHESRNEAGRNLCLI
PSSAHGTNPASAQMAGMDVVVVACDKQGNIDLHDLREKAQAAGEQLSCIMVTYPSTHGVY
EETIREVCQIVHQYGGQVYLDGANMNAQVGITTPGYIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKAHLAPFVPGHQVVKIEGVLTEQGAVSAAPFGSASILPISWMYIRMRGAEGLKQ
ASQMAILNANYIATRLQQAYPVLYTGRDGRVAHECILDIRPLKESTGISEMDIAKRLIDY
GFHAPTMSFPVAGTLMVEPTESESQVEIDRFVDAMLAIRAEINRVAQGEWPLDDNPLVNA
PHTQAELVADWAHPYSRELAVFPAGSEHKYWPSVKRLDDVYGDRNLFCSCVPMSDYALSP
ESV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacactcagtcaactcgaacatgacggcgcgtttatcgagcgccatatcggt
ccttccgtcagccaacagcagcacatgctgtcggtggtcggcgcgacgtcgctggatgcg
ctgatccgccagattgtcccggtggacattcaattgcccagcccgccagcggtgggagag
gcggtgacggaacatgaagcgttagctgagctgaaggccattgcaggacgcaatcaatgt
tataaaagctacatcggcatgggctacagcgcggtgctgatgccgccagtgattttacgc
aacgtgctggaaaatccaggctggtacaccgcctatacgccgtatcagccggaagtctct
caggggcgtcttgaggcgctgctgaatttccagcaggtcacacaggatttaaccggtctg
gatttggcctccgcgtcgctgctggatgaagcgaccgctgcggcggaagcgatggcgatg
gctaagcgcatcagcaaactcaaacaggccgaacgtttcttcgtcgccgacgacgtgcat
ccgcaaacgctggacgtggtgcgtacccgtgcagaaactttcggttttgaaattgtcatc
ggtaaagttgaagaagcgttgaaagacgatgcagtgttcggtgttctgctgcaacaggca
gggacaacgggcgaactgcatgattacagcgacctgatggccgcactgaaagcacgaaag
gtcgtcagctgcgtggcgtcggacatcatggcgctggtattgctgactgcgccgggcaag
cagggcgcggatatcgtcttcggctccgcacagcgctttggcgtaccgatgggctacggt
gggccacacgcggcgttcttcgcctgccgtgatgaacataaacgtgccatgccgggacgt
attatcggcgtgtcgcgcgatgcgacaggtaataccgcgctgcgcatggcgatgcagacg
cgtgaacaacacattcgccgcgagaaggcgaactccaatatttgtacctcgcaggtgttg
ctggccaacattgcggggatgtacgcggtattccacgggccggaagggctcaaacgtatc
gcaggacgcatccaccgtctgaccgatattctggcggcgggattaacacagggcggactg
ctgctgcgtcatcgcagctggttcgacacgctgactatcgaagtcgcggacaaagacgcg
gtgctgagccgggcattaagttttggcatcaacttgcgcagcgatctggcgagtgcggta
ggcatcacgctggatgaagcgaccacgcgtgaagatgtgctggcgctgtttgccgtgctg
ttaggcgacgatcacgggttggatatcgatgcgcttgatgcggccatcggccagaaagcg
gcaacgatccctgctgggctggtgcgccacgacgcgattctgtcgcatccggtgttcaac
cgctatcacagcgaaaccgagatgatgcgctacctgcaccgtctggcgcgtaaagatctg
gcgctgaatcaggcgatgatcccgctcggttcttgcaccatgaagctcaacgcagcggcg
gaaatgttgccgattacctggccggaatttgccgagctgcatccattctgtccgacggaa
caggcgctgggctatcgtcagatgatcgaacagctatcgggctggctggtgcaactgacg
ggctatgacgcgatttgcatgcagcccaactcaggcgcgcagggtgaatatgcggggctg
ctggcgatccgtcgctatcatgaaagccgcaatgaagctggccgtaatctttgtctgatt
cctagctccgcccacggaacgaacccggcatcggcgcagatggcggggatggacgtggta
gtagtcgcctgtgacaagcagggcaatatcgatctgcacgatctgcgtgagaaagcgcag
gcggcgggcgaacagctttcctgcatcatggtgacctatccatccactcacggcgtctat
gaagagacgatccgcgaagtgtgccagatcgtgcatcaatacggcggtcaggtgtatctg
gacggtgcgaacatgaatgcgcaggttggcatcacgacgccgggctacattggtgcagac
gtctcgcacctgaacctgcataaaactttctgtattccacacggcggcggcgggccgggc
atggggccgattggcgtgaaagcgcatctggcaccgtttgtaccgggtcatcaggtggta
aaaatcgagggagtgctgacggaacaaggcgcggtctctgctgcaccgttcggcagtgcg
tctattctgccgattagctggatgtacatccgcatgaggggcgcggaagggctaaaacag
gctagccagatggcgatcctgaacgccaactacatcgcgacgcgcttgcagcaggcgtat
ccggtgctctacaccggccgtgacggtcgcgtggcgcacgagtgcattctggatattcgt
ccgcttaaagagagtacgggtatcagcgagatggatatcgccaagcgcctgatcgactac
ggtttccatgcaccgaccatgtcgttcccggtagcgggcacgctgatggtagaaccaacg
gaatcggagagtcaggtagagatcgatcgctttgttgacgcgatgctggcgatccgtgct
gaaatcaaccgcgtcgcgcagggcgaatggccgctggatgacaatccgctagtcaacgcg
ccgcacacgcaggcggagctggtagccgactgggcgcatccgtacagccgcgagctggcg
gtcttcccagcaggcagcgaacacaaatactggccgagcgtgaagcgtctggacgacgtt
tacggcgaccgtaacctgttctgctcgtgtgtgccgatgagcgactatgcactttcacct
gagtcagtgtaa
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