Pectobacterium parvum: LOZ86_04630
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Entry
LOZ86_04630 CDS
T07916
Name
(GenBank) RNA ligase RtcB family protein
KO
K18148
release factor H-coupled RctB family protein
Organism
ppav
Pectobacterium parvum
Pathway
ppav01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOZ86_04630
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Mst1_SARAH
Motif
Other DBs
NCBI-ProteinID:
UFK40164
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All DBs
Position
complement(1036605..1037726)
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AA seq
373 aa
AA seq
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MGNAIRSISARVSVIATENTWIEDKAIQQLQITSQLPDMVRVTGMPDLHPGRGYPIGAAF
FSQQRFYPALVGNDIGCGMALWRTSLNANKISLDKLEKRLGNIDGPLEDDIEIPPSLADF
RYSLGTIGGGNHFAELQQLDEIYQPDALHALHIDPKQLLLLVHSGSRGLGQTILEAHVRE
FGHQGLEANTPAAESYLEQHQFALTFATHNRRLIAQRMLERWHTEGDAALDVNHNLVTSA
TIEGISGWLHRKGATPADCGPVIIPGSRGDYSYIVQPIPHADSLYSLAHGAGRKWMRTEC
KDRLSSRYSVQQLARTRFGSRVICQDRQLIFQEAPEAYKPIDSVIGAMQQAGLITLIARL
KPVLTYKTRGEDK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctattcgctctatttcggcgcgcgtcagtgtgatcgcgacggaaaatacc
tggattgaagataaagcaatccaacagcttcaaattacatcacaacttcccgatatggtt
cgcgtgaccggcatgccagatttgcatccgggccggggttaccctatcggtgccgccttt
ttttcacagcagcgcttctatccggcgctggtcggaaacgacatcggctgcggcatggcg
ctctggcgcacaagcctgaacgccaacaaaatttcgctggataagctggagaaacggctg
ggtaatatcgatgggccactggaagacgatatcgagattcccccatcgctggcggatttt
cgctattcgctgggcaccatcggcggcggtaatcattttgcggaattacagcaacttgat
gaaatctatcagccagatgcgctgcacgctctgcatattgatcctaaacagctgttgttg
ctcgttcacagcggctcacgcggattaggacaaaccatactggaagcccacgtgcgggaa
ttcggccatcaggggcttgaagccaacacgcctgccgcggagtcgtatctggaacagcac
cagttcgcgctgacgtttgccacccacaatcggcgactgatcgcacagcgaatgctggaa
cgttggcatacggaaggcgatgccgcactggatgtgaaccacaatctggtgacatcagca
acgattgagggcatttccggctggctgcaccgcaaaggcgcgacacccgccgactgtggc
ccggtcatcattcccggttcgcgcggcgactacagctacatcgtgcaacccattcctcac
gccgatagcctgtattcgctggcacatggcgcaggcagaaagtggatgcgcacggagtgt
aaagatcggctgtcttcacgttacagcgttcagcaactcgcgcgtacccgcttcggcagc
cgcgtgatttgtcaggacaggcagttgatttttcaggaagcgccggaagcctacaagcca
atagacagtgtgatcggtgcgatgcagcaggcgggattaatcacgctgattgcccgcctg
aaaccggtactcacctacaaaacgcgcggggaggataaatga
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