Pectobacterium parvum: LOZ86_05455
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Entry
LOZ86_05455 CDS
T07916
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_05455
Transporters [BR:
ppav02000
]
Other transporters
Pores ion channels [TC:
1
]
LOZ86_05455
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UFK40317
LinkDB
All DBs
Position
complement(1222840..1225080)
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AA seq
746 aa
AA seq
DB search
MKPFKFSGVCLSVVGALLAGSALAEEATDVGTINVQGQPLGAGLMVQEDSAKSRSTVTKD
ALDKMPAAGNAIDKLKYTAGLNVSSNDSSGLSGVSYTMRGMSADQVGLSSDGIPVNDSGD
YAVYPNGMGDPENLEQIFVTQGSSEMDGPHIGASGGNIGLVSHRPAKEFGGFVKQTFGSN
NLSKTFARLETGKHNGFSSWLSYSYTDSDKWRGAGYSRADKVEWNGLYEHENGHSSSLIV
KYNQQDTINYSTLSKQQFEQNGRKMDYATTPLYNSRGQISQYYKLNRNNFETLNVTFTQK
LQLRDNLALTLQPYYFSTNGGSFGSGSASVLSATSDRAGNYDLSNLTSNTYYRPSWTETW
RPGITTKLKWDISDEHSLDIGYWFERARQRQTQPFIPIKSDGTPVNISGKPGDANQVTDA
NGNVVQGRNQFTVTPAHKIWIQDTWFFSPEWTFTGGLAYQHVERDGTNLGSLYNVAEKKN
KKYHEFLPSFNAAYRINTENQVFYNITRNMRTPPNYVLYNVGDSINTKPELSWNQELGWR
FQDENMLLSASLFFIRFTDRQISSRNAAGDYEMINAGKVENKGLELEWSGKLPHNFNYFA
AYTYTDTTQKNNLATGGSQLPTTGKQVANAPKNMLNLGLGYDDGLYYAGVNSRYVGSFYG
DMTNDEKIGGRTVFDLSAGVYLPVDKKIVKSATLRFGVNNLFDKEYLDSARSVSFNSRSY
NGVSAGTPFYNVGEERTFSASLEATF
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgttcaaattttctggggtatgtttgtccgtcgtcggcgcattactggcaggc
tccgcgctggcggaggaagcgacagatgtcggcacgatcaacgtacagggacaaccgctc
ggcgcaggattaatggttcaggaagacagcgccaaatcgcgctcgaccgtgacaaaagac
gcgctggataagatgcccgccgcaggcaacgccattgataaactaaaatacactgcgggc
ctgaacgtcagcagtaacgattccagcggcttaagcggcgtcagctataccatgcgcggc
atgagtgcggatcaggtcggcctgtcatcagacggcattcccgtcaatgattccggcgac
tacgccgtgtatccgaacggcatgggcgacccggaaaacctggagcagatcttcgttacc
caaggttcatcagaaatggatggcccgcacatcggtgccagcggcggcaacatcgggctg
gtttcccaccgtccggcgaaagaatttggcggcttcgttaagcagacgttcggcagcaac
aacctcagcaagacctttgcacgtctggaaaccggcaaacacaacggcttcagcagttgg
ctttcttattcgtataccgattccgacaaatggcgcggtgcaggctattcccgcgccgat
aaagtcgagtggaacggcctgtatgaacatgaaaatggccacagcagcagcctgattgtg
aaatacaatcagcaagataccatcaactattcgacgctgagcaaacaacagttcgagcaa
aacgggcgtaagatggattacgccacgaccccgctttacaacagccgtggacagatttcc
caatactacaaactcaaccgcaataactttgaaacgctgaatgtcacgttcacccagaag
ttgcagctgcgcgataatctggcgctgacgttacagccctactatttctcgacgaacggt
ggcagttttggcagcggaagcgccagcgtgttatccgcaacgtcggaccgtgcaggcaac
tacgatctcagcaacctgacctccaacacttattatcgcccgtcgtggacggaaacctgg
cgaccgggtatcaccaccaagctgaaatgggatattagcgacgagcatagtctggatatc
ggctactggttcgagcgtgcccgccagcgtcaaacgcagccgttcattccgattaagagc
gacggcactccggttaacatctccggaaaacccggtgatgcgaatcaggtcaccgacgcg
aacgggaacgtggttcaaggccgtaaccagtttaccgtcacgccagcacataaaatctgg
attcaggacacctggttcttctccccagaatggacgttcaccggcggtctggcctatcag
cacgtagagcgtgacgggactaacctcggcagcttgtataacgtcgcagagaaaaagaac
aagaaataccacgagttcctgcctagctttaacgcggcttaccgcatcaataccgaaaat
caggtgttctataacatcacgcgcaacatgcgtaccccgcccaactacgtcttgtataac
gttggcgattccatcaataccaagcctgagctgagctggaatcaggaactcggctggcgc
ttccaggatgagaacatgctgctgagcgcctcgctgttctttatccgctttaccgatcgc
cagatctccagccgtaacgccgccggcgattacgaaatgatcaacgctgggaaagtggaa
aacaaagggctggaactggagtggagcggcaaactgcctcataacttcaactacttcgcg
gcttatacctataccgataccacacagaaaaacaatctcgccaccggcggcagccagctc
cccaccacgggcaagcaggtcgccaacgcgccgaaaaatatgctcaacctcgggctgggc
tatgacgacggcctctactacgccggtgtgaatagccgctacgtcggatcgttctacggt
gacatgaccaatgacgagaagatcggcggacgtaccgttttcgatctcagcgccggtgtc
tatctgccagtggataagaagatcgtgaaaagcgccaccttacgctttggcgtcaacaac
ctgttcgacaaagagtatctcgactccgcgcgctcagtgagcttcaactcacgatcgtat
aacggcgtatcggctggcacaccgttttacaacgtcggggaagaacgcaccttcagcgcc
tcactggaagccacgttctaa
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