Pectobacterium parvum: LOZ86_05475
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Entry
LOZ86_05475 CDS
T07916
Name
(GenBank) Svx/AvrXca family virulence/avirulence protein
Organism
ppav
Pectobacterium parvum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6055
Peptidase_M60
Peptidase_M9
Motif
Other DBs
NCBI-ProteinID:
UFK40321
LinkDB
All DBs
Position
complement(1228421..1230286)
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AA seq
621 aa
AA seq
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MPTIKTLLTPLNCLLVLSGALMVNTANAAEACVAGNWQVDNSITDMPSVKYQTEHFAFRW
NNNDVNRNDAVAAGQKLEQIWDKFIKQIQFPEPYCKQTVKYKANIHIDPTFGLSGGIAGG
GSMGMWIGPASLKDNWGLAHEFTHALQGQTGGFQSSGDNYVGWIWESHANWMTHQMDEFR
GTSAHCSEMQVNYSHIYLGSTRNRYCNWQFMEYLKNRFGYGAINDMWAKAPKWGESGQST
ADPLSILRTNMGWSQSEFNDVFGDWAMHNVNWDYVDPDGFDRGRFYRSTYGSYGAVQPNQ
NNADRLLRTTALEPVVGASASLRRFSVPFDQAPQQLGYNIVKLIPESGATKITVKFRGMV
QSKSAITRLPGLKNDPATMPQPNSDWRWGIVAVGADGVSRYSELQRGASATVKNFTIRQD
DRGIYMVVMGTPSQMQKIKWDQAYYSLYRYPWMADFTGVWPEGSQPGAPNPTANGSRHAN
GGGWVSNSANVAPTAYVGPYARVIGGTVRDNARIEDRATILSGTVEGRAVVGGLTVLQGN
TVVRDNARLHTVFMGPGAFERGIVLSGNAQMRGDAEIRGASASQGVFYGFIDENEVRSSE
AGAYLTDAVPEVTAVPVYSTK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaataaaaacacttctcacgccactaaactgtctactcgttttaagcggcgca
ttgatggtcaatacggcaaacgccgctgaggcttgtgtcgcgggcaactggcaggtggat
aattccatcaccgatatgccttccgtgaaataccagactgagcactttgccttccgctgg
aataataacgacgttaaccgcaatgatgcggttgccgcagggcagaaactggaacaaatt
tgggataagtttattaaacaaattcagttccccgagccttattgcaaacagaccgtgaaa
tataaagccaatattcacatcgatcctacctttgggctcagcgggggtattgcaggtggt
ggcagcatgggaatgtggatcggccctgcgtcactcaaggataactgggggctggcgcac
gaatttacccatgcgctgcaagggcaaaccggcggcttccagagttcgggcgataactac
gttggctggatttgggaatcccacgcgaactggatgacgcaccagatggatgaattccgc
ggtacgtcggcacactgctcggaaatgcaggtcaactactcgcatatttatctgggttca
acacgtaaccgctactgcaactggcagtttatggaatacctgaaaaaccgctttggctat
ggtgccatcaacgatatgtgggcaaaagcgccgaaatggggcgaaagcggtcagtctacc
gccgatccgctgtctattctgcgcaccaacatgggctggagccagtctgaattcaacgat
gtcttcggcgactgggcgatgcacaacgtcaactgggattacgtcgatccagacggtttc
gaccgtggccgtttttaccgctcaacctacggcagctatggtgcggtccaacccaaccag
aataacgctgaccgcttgctgagaaccactgcgcttgagcccgttgtcggtgccagcgcc
agccttcgccgcttctccgtgccgttcgatcaggctccgcagcagttaggctacaacatc
gtcaaacttatcccagaaagcggtgcgacgaaaatcaccgttaaattccgtggcatggtg
cagagtaaatcggccattacccgcttacctgggctgaaaaacgatccggcaaccatgcca
cagccgaattctgactggcgctggggtattgtcgctgtcggtgcagacggcgtttctcgc
tacagtgaattgcagcgcggcgcatccgccacagtgaaaaacttcactattcgtcaagac
gatcgcggcatttacatggtggtcatgggcacaccgtcgcaaatgcagaagatcaagtgg
gatcaagcttactactccctttaccgctacccgtggatggctgatttcactggcgtctgg
ccggaaggcagccagcctggtgcgccgaatccaaccgctaacggttctcgtcacgcaaac
ggcggcggctgggtatccaactcagccaatgttgcccctaccgcgtacgtcgggccttat
gctcgcgtcatcggcgggacggtgagagataacgccagaattgaagatcgtgcaacgatt
ctgagcggaacggtggaaggtcgcgccgttgtcggcggcctgacggtgctacagggtaat
accgtggtacgcgataacgcgcgactgcatacggtcttcatggggccgggtgcgtttgag
cgcggtattgtgctgtcaggcaatgcgcaaatgcgtggagatgcggaaattcgcggcgct
tccgcgtcgcagggcgtgttctatggctttattgatgagaatgaagtcagaagcagcgaa
gccggtgcttacctgaccgatgccgtgccagaagtgacggccgttccggtctatagcacg
aagtaa
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