Pectobacterium parvum: LOZ86_05735
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Entry
LOZ86_05735 CDS
T07916
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav03030
DNA replication
ppav03430
Mismatch repair
ppav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOZ86_05735 (dnaQ)
03430 Mismatch repair
LOZ86_05735 (dnaQ)
03440 Homologous recombination
LOZ86_05735 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppav03032
]
LOZ86_05735 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_05735 (dnaQ)
Enzymes [BR:
ppav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOZ86_05735 (dnaQ)
DNA replication proteins [BR:
ppav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOZ86_05735 (dnaQ)
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOZ86_05735 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UFK40363
LinkDB
All DBs
Position
1287924..1288661
Genome browser
AA seq
245 aa
AA seq
DB search
MSTEITRQIVLDTETTGMNKLGVHYEGHKIIEIGAVEVINRRLTGRHFHVYIKPDRLVDP
EAYNIHGISDEFLADKPTYADVVDDFLDFIRGAELVIHNATFDIGFMDYEFRLLNRDIPK
TETFCKITDSLFMARKIFPGKRNSLDALCDRYLIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSLTFSMEGEAQQKSDNTETIQRIVRPQSALKVLYADETELLAHEQRLDLIAKKGGSC
LWRAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgaaattacgcgacaaatcgtcctggatacagaaaccaccggtatgaataag
ctgggggttcactacgaagggcataaaattatcgagatcggtgcggtcgaagtgattaac
cggcgcctgactggtcgtcattttcatgtctatatcaaacccgatcgtttagtggatcca
gaagcctataacatacatggtatcagtgatgagtttctggctgataaaccgacgtatgcg
gatgtcgtggatgacttcctcgattttatccgtggcgcggaattagtcattcataacgcg
acgtttgacatcggctttatggattacgaattccgcttgctgaatcgggatatacccaag
actgagacgttctgtaagatcactgatagcctgtttatggcgcggaagatctttcccggc
aagcgtaacagtttggatgccctctgcgatcgctacctgatagataacagcaagcgtacg
ctgcacggcgcattgctcgatgccgagattttggcagaagtttatctggcgatgactggc
ggtcaaacttctctgactttttcgatggaaggtgaagcgcagcagaagagcgataatacc
gaaacgatccagagaatcgtccgtcctcaatcggcgttaaaggtgctttacgctgatgaa
acagagctgctggcgcatgaacaacgtctggatttaattgctaaaaaaggcggtagttgc
ctgtggcgggcagaatag
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