Pectobacterium parvum: LOZ86_06015
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Entry
LOZ86_06015 CDS
T07916
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOZ86_06015 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_06015 (ung)
Enzymes [BR:
ppav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LOZ86_06015 (ung)
DNA repair and recombination proteins [BR:
ppav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOZ86_06015 (ung)
Prokaryotic type
LOZ86_06015 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFK41283
LinkDB
All DBs
Position
complement(1342737..1343423)
Genome browser
AA seq
228 aa
AA seq
DB search
MATSLTWHDVLAQEKQQPYFINTLEFVGKERAAGKTIYPPQKDVFNAFRFTELHQVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLGNIYKELASNIPGFEIPRHGFLQSWAEQGVL
LLNTVLTVEAGQAHSHANLGWETFTDRVIAALNEQREGLVFLLWGSHAQKKGNIIDQQRH
HILKSPHPSPLSAHRGFLGCKHFSQANQLLEQQGLSPIDWTPRLPEEA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctcacctggcatgacgtgctggcacaagaaaagcagcagccttacttc
attaatacccttgaattcgttgggaaagaacgtgcagcgggtaagactatctatcctccg
cagaaagatgttttcaacgcgttccgctttactgaactgcatcaggtcaaagtcgtcatt
ctgggacaagatccctatcacggcccaaatcaggcacacgggctgtcattttctgtgcgc
cctggcgtacccgctccgccttctctgggtaatatttataaagaattggcgagcaacatc
ccaggatttgaaattccacggcacggttttctgcaaagctgggcggagcaaggcgtttta
ctgctcaacacggtattaaccgttgaagccggacaggcgcactcgcatgctaatttaggc
tgggaaacgtttactgaccgcgtcatcgcggcattgaatgaacagcgggaaggtctggta
tttctcctgtggggctcgcatgcacagaaaaaaggcaacatcattgaccagcagcgccac
catattctgaaatcgccgcatccttccccactgtccgcacaccgtggtttcttgggctgt
aagcatttttcgcaggctaatcagcttctggaacagcaaggactgtcgccaatagactgg
acgccaaggcttccggaagaggcttaa
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