KEGG   Pectobacterium parvum: LOZ86_06075
Entry
LOZ86_06075       CDS       T07916                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppav  Pectobacterium parvum
Pathway
ppav03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppav00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LOZ86_06075 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppav03019]
    LOZ86_06075 (rnc)
   03009 Ribosome biogenesis [BR:ppav03009]
    LOZ86_06075 (rnc)
   03036 Chromosome and associated proteins [BR:ppav03036]
    LOZ86_06075 (rnc)
Enzymes [BR:ppav01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LOZ86_06075 (rnc)
Messenger RNA biogenesis [BR:ppav03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LOZ86_06075 (rnc)
Ribosome biogenesis [BR:ppav03009]
 Eukaryotic type
  90S particles
   RNase
    LOZ86_06075 (rnc)
 Prokaryotic type
  rRNA processing factors
   LOZ86_06075 (rnc)
Chromosome and associated proteins [BR:ppav03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LOZ86_06075 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: UFK40419
LinkDB
Position
1354640..1355320
AA seq 226 aa
MNPILINRLQRKLGYTFQQYELLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PKVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIQTIERLILNWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPAYLVVQVR
GEAHDQEFTIHCQVSGFSESVIGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaatcccattctgataaatcgtttacaaagaaagctgggctatacttttcagcagtac
gagcttttgttacaggcgttgacgcaccgtagcgccagcagcaaacataatgaaagactc
gaattcctgggtgactccatcctgagttttgtgatcgctaatgcgctgtatcatcgtttc
cccaaggttgatgaaggggacatgagtcggatgcgagcgacgctggtgcgaggaaacacg
ctggcggaaatcgcgcgtgaattcgaactgggagagtgcttacgcctcggtcccggtgaa
ttaaagagcggtggtttccgtcgtgaatcgatcctggcggatacggtcgaagcgctgatt
ggcggcattttcctcgacagcgacattcagactatcgaacgtttgatcctaaactggtat
cagacgcgtctggatgaaatcagtcctggcgataagcaaaaagatccgaaaacgcggttg
caggaatttctgcaagggcgtcacttacctctgccggcctatctggtggtgcaggttcgt
ggggaagcacacgatcaggagtttactatccactgtcaggtgagcggctttagtgagtcg
gtcattggtacaggatcgagccgtcgtaaagccgaacaggctgcggctgaacaagcgttg
aaaaaactggagcttgaatga

DBGET integrated database retrieval system