Pectobacterium parvum: LOZ86_06130
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Entry
LOZ86_06130 CDS
T07916
Name
(GenBank) Ig-like domain-containing protein
Organism
ppav
Pectobacterium parvum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
UFK41284
LinkDB
All DBs
Position
1367536..1377147
Genome browser
AA seq
3203 aa
AA seq
DB search
MIGVIKFVIGQAFIVALDGSQRLLVAGDRVYSGEEVVTGANGAVSITLPDGKTLDLGRDS
RWSDVSNASSQASADVADDVAAIQDAIAQGTDPTQVLEATAAGNDDTGEAGDGGGGHFNP
TVVLNLTAEVVTTPIGYDTAGLSFTDRASSVLDGVDSSTLLAAATDTTDTTPPSVTIVIN
SDGTVSFVFTKPIIGFDLSDITVTNGSITNLVQDPNDPTRWTATLTPAANFEGEVRLSIP
DGSYTNAAGIPGTGGSEAVTVDTLPPVASISIDNVTNDNVINASESGQTIAVTGQVGNEV
KAGDAVTVTVGTETYQTTVNTDGKTWSVNVPGSVLAANGDVSAAVTTRDTAGNATTANTN
HTYGVDTVAPVASISIDNVTSDNVINATESGQTIAVTGQVGNEVKAGDAVTVKVGTETYQ
TTVNTDGKTWSVNVPGSVLAANGDVSATVTTRDTAGNVTTANTSHTYGVDTVAPVASISI
DNVTNDNVINASESGQTIAVTGQVGNEVKAGDAITVTVGTETYQTTVNTDGKTWNVNVPG
AVLAANGDVSATVTTRDTAGNVTTANTSHTYGVDTVAPTASITIDNVTADNVINATESGQ
TIAVTGKVGNEVKAGDAVTVTVGTDTYQTTVNTDGKTWSVNVPGSILAANSDVSATVTTR
DTAGNVTTANTSHTYGVDTVAPVASISIDNVTSDNVINATESGQTIAVTGQVGNEVNAGD
AVTVTVGTETYQTTVNADGKTWSVNVPGSVLAVNGDVSASVTTRDTAGNVTIANTSHAYG
VDTVAPVASISIDDVTNDNVINASESGQTIAVTGQVGNEVKAGDAVTVTVGTETYQTTVN
TDGKTWSVNVPGSVLATNGDVSATVTTRDTAGNVTTANTSHAYGVDTVAPVASISIDNVT
SDNVINATESGQTIAVTGKVDNDVKAGDAVTVTVGTETYQTTVNTDGKTWNVNVPGSVLA
ANGDVSATVTTRDTAGNVTTANTSHTYGVDTVAPVASIAIDNVTNDNVINASESGQTIAV
TGKVDNDVKAGDAVTVTVGTETYQTTVNTDGKTWSVNVPGSVLATNGDVSATVTTRDTAG
NVTTANTSHAYGVDTVAPVASISIDNVTSDNVINATESGQTIAVTGKVDNDVKAGDAVTV
TVGTETYQTTVNTDGKTWNVNVPGAVLAANGDVSATVTTRDTAGNVTTANTSHTYGVDTV
APTASITIDNVTADNVINATESGQTIAVTGKVGNEVKAGDAVTVTVGTDTYQTTVNTDGK
TWSVNVPGSILAANSDVSATVTTRDTAGNVTTANTSHTYGVDTVAPVASISIDNVTSDNV
INATESGQTIAVTGQVGNEVNAGDAVTVTVGTETYQTTVNADGKTWSVNVPGSVLAVNGD
VSASVTTRDTAGNVTIANTSHAYGVDTVAPVASISIDDVTNDNVINASESGQTIAVTGQV
GNEVKAGDVVTVTVGTETYQTTVNTDGKTWSVNVPGSVLATNGDVSATVTTRDTAGNATT
ANTNHTYGVDTVAPVASISIDNVTNDNVINASESGQTIAVTGQVGNEVKAGDAVTVTVGT
ETYQTTVNTDGKTWSVNVPGSVLAANGDVSATVTTRDTAGNVTTANTSHTYGVDTVARVA
SISIDNVTNDNVINASESGQTIAVTGQVGNEVNAGDAITVKVGTETYQTTVNTDGKTWSV
NVPGSVLAANGDVSATVTTRDTAGNATTANTNHTYGVDTVAPVASISIDNVTSDNVINAT
ESGQTIAVTGQVGNEVKAGDAITVTVGTETYQTTVNTDGKTWSVNVPGSILAANSDVSAT
VTTRDPAGNVTTANTSHTYGVDTVAPVASISIDNVTNDNVINASESGQTIAVTGQVGNEV
KAGDAVTVKVGTETYQTTVNTDGKTWSVNVPGAVLAANGDVSATVTTRDTAGNVTTANTN
HTYGVDTVAPVASISIDNVTSDNVINAAESGQTIAVTGKVGNEVKAGDAVTVKVGTETYQ
TTVNTDGKTWSVNVPGSVLAANGDVSATVTTRDTAGNVTTANTSHTYGVDTVAPVASISI
DNVTSDNVINASESGQTIAVTGKVGNEVKAGDSVTVKVGTETYQTTVNTDGKTWSVNVPG
AVLAANGNVSATVTTRDPAGNVTTANTSHTYGVDTVAPVASIAIDNVTNDNVINATESGQ
TIAVTGKVGNEVKAGDAITVKVGTETYQTTVNTDGKTWSVNIPGSVLAANSDVSATVTTR
DPAGNVTTANTSHTYGVDTVAPVASIAIDNVTSDNVINASESGQTIAVTGKVGNEVKAGD
AVTVKVGTETYQTTINTDGKTWSVNVPGSVLAANGDVSATVTTRDTAGNATTANTSHTYG
VDTVAPVASISIDNVTSDNVINANESRQTIPVTGKVGNEVRAGDSVTVKIGTETYQTTVN
TDGKTWSVNVPGAVLAANSDISASVTTRDTAGNATTANTHHAYSVDTTAPEIDITNFAGN
DGYVSQSESKNTQVSGTSNEKKVDLVFTDVNGKSVTLHDVPVTNGKWQTNVDLSTLAEGK
ITAGATATDAAGNQAHDNSQAIMDVTPPAAHNNTVSGTEDTPLHIGWSDLGVSSDTTSIV
ISSLPPAAAGTLYFNDNGSWKAVTAGQSFTAGTTDLRFTPASNVSGAALGDIAYRPVDSA
GNTGDKAALHIGITPVADAPVVSLSTSSVTTTQASAEVIKVNGGSANGGFDVQNGKIVAV
GNGVRVWLTEGDSVPTVVGNGKVAYYSQGNTSGDGNYSDIFVVHSNSGYFYRQSDWAADR
KDHRDLDSFNGNRTNNGSNAHSDYVFVIKETGYTYNATYSTNNNANTSVNTLDGLKVNYT
DSSGKSGSFTRQVSNNIEGVIYSDGSTYTPGTNSATVEKVPGQAGKQTYTLDVSAALTDR
DGSETLSGIRLTGIPTGTVLTDQINNVKYTVGADGSYLIQNAHNALTLAGKITLEVPADA
GKLNVVAQATSTEMGNHDTATGYSAEGAEQYGLSVGAAGNDTMSGTYNDDVLFGDVVSFP
NIDGNGIAALQNYIGKQLGMQTGVPTTKDMHNYIAAHSSEFDLSSSKGGNDILNGGAGDD
ILFGQGGNDTLYGGAGNDLLYGGSGDDILIGGAGGDTLIGGAGADTFKWQAGDIGNDVIK
DFNAKEGDRIDLSDLVGELEEGTDISRYIRITDNHGSPTIEVSTAGNFTADKGGTVAVSI
TLEHYNGALPSLESLVSKPEPSS
NT seq
9612 nt
NT seq
+upstream
nt +downstream
nt
gtgattggtgtcattaagttcgttattggacaagcatttatcgtcgcgcttgatggaagc
cagagactgctagttgctggcgatcgggtttacagcggtgaagaagtggtaaccggcgct
aatggcgcggtttcaatcacattaccggatggcaaaacattggatttggggcgtgatagc
cgctggagcgatgttagcaacgcgtcctctcaggccagtgcggatgtcgccgatgatgtc
gctgctatacaagatgccatcgctcagggcaccgacccaacacaagtattagaagcgact
gccgcaggtaatgacgacaccggagaagcgggtgacggcggcggtgggcatttcaatcca
acggtagttctgaatttgacagccgaggtcgttacgaccccgattggttatgataccgcg
ggcctatcgtttactgaccgggcctcgtccgttctggatggcgtagattcatccacgttg
ctggctgcggcaacggataccaccgataccactccgccttctgtcaccattgtcataaac
agtgatggcacagtaagtttcgtcttcacaaaaccgattattggttttgacctcagtgat
atcaccgtaacaaatggctcaataacgaatctggtacaggatcctaacgatccgactcgc
tggacggcgacattgacgccagccgccaattttgagggagaagtccgtctcagcattcct
gacggcagctacaccaatgctgcgggcattcctggcacgggtggaagtgaagcggtaacg
gtcgatactttgccccctgttgcctcaatttctattgataatgtcaccaacgataacgtg
attaacgccagcgaatcgggtcagacgattgccgtgaccggtcaggttggtaatgaagtg
aaagcgggtgatgcggttaccgttaccgtcggtaccgagacctaccagaccacggtcaat
accgatggcaaaacctggagcgtcaacgttccgggatccgtgctggcagcgaatggtgat
gtgagtgcggcagtcaccacacgtgatactgcgggtaacgccaccaccgcgaatactaat
cacacatacggcgtggatacggttgcgccggtcgcgtcgatttctatcgataacgtcacg
tccgataacgtgatcaatgcgaccgaatccggtcagacgattgccgtcaccggtcaggtt
ggcaatgaagtcaaagcgggcgatgcagttaccgtcaaagtcggtactgaaacctaccag
acgacggtgaataccgatggcaagacctggagcgtgaatgttccgggatctgtgctggca
gccaatggtgatgtgagtgcgacggtgacgacgcgcgatacggcaggtaacgtcaccacc
gccaatacctcgcacacttacggcgtggataccgttgcacctgtggcgtcgatctctatt
gataatgtcaccaacgataacgtgattaacgccagcgaatcgggtcagaccattgccgtg
accggtcaggtcggtaatgaagtcaaagcgggcgatgccatcaccgttactgttggcacc
gagacctatcagaccacggtaaacaccgacggcaagacctggaacgtgaacgttccgggg
gcggtgctggccgcgaatggcgatgtgagtgccacggtcacgacacgtgatacggcaggt
aacgtcactactgcgaacaccagccacacttacggtgtggacaccgttgcgccaaccgca
tcgattactatcgataacgtcaccgctgacaatgtcatcaatgcgaccgaatccggtcag
acgatagcggtgacggggaaagttggtaatgaagtgaaagcgggtgatgcggttacggtt
accgtcggcacggacacgtaccagaccaccgtgaataccgatggcaaaacctggagcgtc
aatgttcccggttcgattctggcagccaatagcgatgtgagtgccactgtcaccacccgc
gatacggcaggcaatgtcactactgcgaacaccagtcacacttacggtgtcgatacggtt
gcgcctgtggcgtcgatctctatcgacaatgtcaccagcgataatgtgattaatgcgacc
gagtccggtcagacgattgcggtgaccggtcaggtcggtaatgaagtcaacgcgggcgat
gcggttaccgttaccgtcggcacagagacctatcagacgacggtcaatgcggatggcaaa
acctggagcgtgaacgttccgggatctgtacttgctgttaacggtgatgtctctgcttca
gtcaccacacgtgatacggcaggcaatgtcaccatcgccaataccagccacgcttacggt
gtggacaccgttgcgccagtagcgtcgatctctattgatgatgtcaccaacgataacgtg
attaacgccagcgaatcgggtcagacgattgccgtgaccggtcaggttggtaatgaagtg
aaagcgggtgatgcggttaccgttaccgtcggtaccgagacctaccagaccaccgtcaat
accgatggcaagacctggagtgtcaatgttcctggatccgtgctggctaccaatggtgat
gtgagtgccacggtcacgacacgcgataccgcaggcaatgtcaccaccgccaataccagc
cacgcttacggcgtcgatacggttgcgcctgtggcgtcgatctctatcgacaatgtcacc
agcgataatgtgattaatgcgaccgagtccggccagacgatagccgtgacgggtaaagtc
gataacgacgttaaagctggcgatgcggttacggttaccgtcggcaccgagacgtaccag
accacggtgaataccgatggcaagacctggaacgtcaacgtaccggggtcggtgctggca
gcaaacggtgatgtgagtgccacggtcacgacacgtgatacggcaggcaatgtcaccacc
gcgaataccagccacacttacggcgtcgataccgtcgcgccggtggcgtcgattgctatt
gataatgtcaccaacgataacgtgattaacgccagcgaatcgggtcagacgattgccgtg
acgggtaaagtcgataacgacgtgaaagcgggcgatgcggttaccgttaccgtcggtacc
gagacctaccagaccaccgtcaataccgatggcaagacctggagtgtcaatgttcctgga
tccgtgctggctaccaatggtgatgtgagtgccacggtcacgacacgcgataccgcaggc
aatgtcaccaccgccaataccagccacgcttacggcgtcgatacggttgcgcctgtggcg
tcgatttctatcgacaatgtcaccagcgataatgtgattaatgcgaccgagtccggccag
acgatagccgtgacgggtaaagtcgataacgacgttaaagctggcgatgcggttacggtt
accgtcggcaccgagacgtaccagaccacggtgaataccgatggcaagacctggaacgtc
aacgtaccgggggcggtgctggcagcgaatggcgatgtgagtgccacggtcacgacacgt
gatacggcaggtaacgtcactactgcgaacaccagccacacttacggtgtggacaccgtt
gcgccaaccgcatcgattactatcgataacgtcaccgctgacaatgtcatcaatgctacc
gaatccggtcagacgatagcggtgacggggaaagttggtaatgaagtgaaagcgggtgat
gcggttacggttaccgtcggcacggacacgtaccagaccaccgtgaataccgatggcaaa
acctggagcgtcaatgttcccggttcgattctggcagccaatagcgatgtgagtgccact
gtcaccacccgcgatacggcaggcaatgtcactactgcgaacaccagtcacacttacggt
gtcgatacggttgcgcctgtggcgtcgatctctatcgacaatgtcaccagcgataatgtg
attaatgcgaccgagtccggtcagacgattgcggtgaccggtcaggtcggtaatgaagtc
aacgcgggcgatgcggttaccgttaccgtcggcacagagacctatcagacgacggtcaat
gcggatggcaaaacctggagcgtgaacgttccgggatctgtacttgctgttaacggtgat
gtctctgcttcagtcaccacacgtgatacggcaggcaatgtcaccatcgccaataccagc
cacgcttacggtgtggacaccgttgcgccagtagcgtcgatctctattgatgatgtcacc
aacgataacgtgattaacgccagcgaatcgggtcagacgattgccgtgaccggtcaggtt
ggtaatgaagtgaaagcgggtgatgtggttaccgttaccgtcggtaccgagacctaccag
accaccgtcaataccgatggcaagacctggagtgtcaatgttcctggatccgtgctggct
accaatggtgatgtgagtgccactgtcacgacacgcgatactgcgggtaacgccaccacc
gcgaatactaatcacacatacggcgtggatacggttgcgccggtcgcgtcgatctctatt
gataatgtcaccaacgataacgtgattaacgccagcgaatcgggtcagacgattgccgtg
accggtcaggttggtaatgaagtgaaagcgggtgatgcggttaccgttaccgtcggtacc
gagacctatcagacgacggtgaataccgacggtaaaacctggagcgtgaatgttccggga
tcggtgctggcagcaaacggtgatgtgagcgccacggtcaccacgcgcgataccgcaggc
aatgtcacgactgcgaacactagtcacacttacggtgtcgataccgttgcacgtgtggcg
tcgatctctattgataatgtcaccaacgataacgtgattaacgccagcgaatccggtcag
accattgcggtgaccggtcaggtcggtaatgaagtcaacgcgggcgacgccattaccgtc
aaagtcggtaccgagacctaccagaccaccgtgaataccgatggcaaaacctggagcgtc
aatgttccgggatcggtgctggccgccaatggcgatgtgagcgccactgtcacgacacgc
gatactgcgggtaacgccaccaccgcgaatactaatcacacatacggcgtggatacggtt
gcgccggtcgcgtcgatttctatcgataacgtcacgtccgataacgtgatcaatgcgacc
gaatccggacagacgattgcggtcaccggtcaggttggcaacgaagtgaaagcgggtgat
gccatcaccgttactgttggcaccgagacctatcagaccacggtaaacaccgatggcaaa
acctggagcgtcaatgttcccggttcgattctggcagccaatagcgatgtgagtgccact
gtcacgacacgcgatccagcgggcaatgtcaccacggccaatacctcgcacacttacggc
gtggataccgttgcacctgtggcgtcgatctctattgataatgtcaccaacgataacgtg
attaacgccagcgaatcgggtcagacgattgccgtgaccggtcaggttggtaatgaagtg
aaagcgggtgatgcggttacggttaaagtcggtaccgaaacgtaccagaccacggtgaat
accgacggtaaaacttggagcgtgaatgttccgggagccgtgctggcagcgaatggtgat
gtgagtgccacggtgaccacacgcgataccgcagggaacgtcaccactgccaataccaat
cacacttatggtgtggataccgttgcgccagtggcgtcgatctctatcgacaatgtcacc
agcgataatgtgattaatgcggccgaatcgggtcagaccattgcggtcaccggtaaggtg
ggcaatgaagtcaaagcgggcgatgcggttaccgtgaaagtcggcacggaaacgtaccag
acgacggtgaataccgatggcaaaacctggagtgtcaatgttcccggttcggtgctggcc
gcgaatggcgatgtgagtgcgacggtgaccacgcgcgataccgccggcaatgtcaccacc
gctaataccagtcacacttacggtgtggacaccgtcgcgccggtggcgtccatctctatt
gataatgtcaccagcgataacgtgattaacgccagcgaatccggtcagacgattgcggtc
actggcaaggtgggcaatgaagtcaaagcgggcgatagcgttaccgtcaaagtcggcacc
gaaacctaccagaccacggtgaataccgatggcaaaacctggagcgtgaatgttccgggt
gcggtgctggcagcaaacggtaatgtgagtgcgacggtcactactcgcgatccagcgggc
aatgtcaccacggccaatacctcgcacacttacggcgtggataccgttgcacctgtggcg
tcgattgctattgataatgtcaccaacgataacgtgattaacgcgaccgagtccggtcag
accattgctgtcactggcaaggtgggcaatgaagtcaaagcgggcgacgcgatcactgtc
aaagtcggtacggaaacctatcagacgacggtgaataccgacggtaaaacctggagcgtg
aatattccgggatccgtgctggccgcgaatagtgatgtgagtgcgacagtcaccacacgc
gatccagcaggcaatgtcaccaccgcgaataccagccacacttacggtgtggacaccgtt
gcaccagtagcctcgattgctatcgacaatgtcacgtcagataacgtgattaacgccagc
gaatccggccagacgattgcggtcactggcaaggtgggcaatgaagtcaaagccggtgat
gcggttaccgtgaaagtcggtaccgagacctaccagacgacgatcaatactgacggcaag
acctggagcgtcaacgttccggggtcggtgctggcggcgaatggcgatgtgagtgcgacg
gtcacgacgcgcgatacggcaggtaacgccaccaccgcgaacaccagccacacttacggc
gtggatacagttgcaccggttgcgtcgatctctatcgacaatgtcacgtccgataacgtc
attaacgctaatgaatccagacaaacgatccctgttaccggaaaagtcggtaatgaggtt
agggcgggcgatagcgttacggtaaaaattggcaccgagacctaccagaccaccgtcaat
acggatggtaaaacctggagtgtgaatgttcccggtgcggtactggcggctaacagtgac
attagcgccagcgtgaccacgcgtgataccgccgggaatgccactacggcgaatacccat
catgcatacagcgtggatacgaccgcaccagaaattgatattacgaatttcgcgggtaac
gatggctatgtcagccagagtgagtcgaaaaacactcaggtcagcggcaccagcaacgag
aagaaggtcgatctggtctttaccgatgtgaatggtaagtcggttacgctgcatgacgtg
cccgtgacgaacggaaaatggcagacgaatgtcgatctgagtacgttagcggaaggcaag
attactgctggggcgacggcaaccgatgcggcaggtaatcaagcgcatgataacagtcag
gctatcatggatgttacgccgccagccgcacacaacaacacggtgtctggtacggaagac
acgccgttgcacattggctggagcgatctgggtgtatcgagcgataccaccagcatcgtg
atttcgtctctgccgcctgctgccgctggcacgctctattttaatgataacgggagttgg
aaagcggtcaccgctggacaatcctttacggctggcaccaccgatctacgctttacgcca
gcgagtaatgtctctggcgccgcgctgggggacattgcttaccgacctgtcgatagcgca
gggaacacgggcgataaagccgcgctgcacattggtattacgccagtcgccgatgcgcca
gttgtgagcctgagcacctccagcgtgaccacgacgcaagcttctgcggaagtcattaag
gtgaatgggggaagcgcgaacggtggctttgacgtgcagaacggaaaaattgtcgcggtg
ggtaacggcgttcgcgtctggctgaccgagggggattcggtccctaccgtagtcggcaac
gggaaggtggcgtactacagtcagggcaataccagcggggatggcaattacagcgatatc
ttcgttgtgcactccaacagcggctatttttatcgtcagagcgactgggcggccgatcgt
aaggatcaccgcgatctggattcattcaacggtaaccgcaccaataacggcagcaacgcg
cattctgactacgttttcgttatcaaggaaacgggctatacctataacgcgacctatagc
accaacaacaatgcgaatacgtcggtcaacacgctggatgggctgaaggttaattatacc
gatagcagtggcaagtcaggctcgtttacgaggcaggttagcaacaatattgaaggcgtg
atctacagcgatggatcgacgtatacccccggaaccaatagcgcgacggtggaaaaagtc
cccggtcaggcgggaaaacagacttatacgctcgatgtttccgcggcattgaccgaccgc
gacggtagcgaaacgctgtcagggattaggttgacggggatcccaacgggaacggtgctg
accgaccagattaataacgtgaaatataccgtcggtgctgatggttcgtacctgattcaa
aatgcgcacaacgccctgacgttagccgggaaaatcacgcttgaggtgccggctgatgcg
ggtaaattgaatgtcgtggcgcaggcgacatcgacagaaatgggcaaccacgatacggcg
accggctattcggcggaaggtgctgaacagtatgggctgagtgtcggtgcggcgggcaat
gacacgatgtccggcacgtataatgatgatgtgctgtttggcgatgtcgtgtcgttccct
aatatcgacggtaacggcattgcggctttacagaactacatcggcaaacaattaggcatg
caaacgggcgtcccgacgacgaaagacatgcataactatattgctgcgcacagttcagag
tttgatctgtcgtcgtcgaaaggggggaatgacatactcaatggcggcgcaggggatgat
atcctcttcggtcagggaggaaatgacaccctctacggtggggcgggaaatgacctgctc
tacggcggcagcggagacgacatcctgattggcggcgcggggggcgatacgctcatcggc
ggggcgggtgcggatacctttaagtggcaggctggtgacatcggcaacgatgtgatcaaa
gacttcaatgccaaagaaggtgaccggattgatttaagcgatctggttggcgaactggag
gaaggcaccgatatcagccgttatattcgcatcaccgataatcatggttcaccgacgatt
gaagtgagcaccgcggggaactttacggcggataaaggcggaacggttgcagtgtcgatt
acgttggaacactataacggtgcattgccgtcgcttgaaagtctggtcagcaagccagaa
ccgtctagctga
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