Pectobacterium parvum: LOZ86_06450
Help
Entry
LOZ86_06450 CDS
T07916
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00550
Peptidoglycan biosynthesis
ppav01100
Metabolic pathways
ppav01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOZ86_06450 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOZ86_06450 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppav01011
]
LOZ86_06450 (mrdA)
Enzymes [BR:
ppav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LOZ86_06450 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppav01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LOZ86_06450 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
UFK40487
LinkDB
All DBs
Position
complement(1444988..1446892)
Genome browser
AA seq
634 aa
AA seq
DB search
MKVERKPFRDYTAESALFVRRALVAFLGILLLSGVLVANLYHLQIVRVDDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELVPDKVDNLKDTLEALRPVVDLTDSDLENF
EKERKRSRRFTSIPVKSGLDEIQVARFAVNQYRFPGVEVKGYQRRYYPYGSALTHVTGYV
SKITDKEVERLTKEEKIADYAATRDIGKLGIERHYEDLLHGKPGYEEVEVNNRGRVIRQL
HEQPPQAGRDIYLTLDLSLQIYIEKLLEGSRAAVIVTDPRDGGILAMVSTPSYDPNLFVD
GISTKNYAKLQSDPDRPLINRATQGIYPPASTVKPYIAVSALTAGVITTNTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNLTKSLEESADTFFYQVAYDMGIDRLSEWMTKFGYGERTGI
DISEESKGNMPTREWKLGRFKKPWYQGDTIPVGIGQGYWTATPIQMNKALVTLINDGQVK
TPHLLYSSRENGKIVPFRQTENQQIGNIHSGYWEVAKDGMYGVANRPNGTAHKSFDDAPY
KIAAKSGTAQVFGLKENETYNAHKIAEHLRDHKLMVAFAPYKDPKVAMSIILENGGAGPT
VSTITRQILDHILLGDNNTDLPSAPPAPPGSESE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagaacgtaaaccctttcgtgattatacggctgagtccgctctgtttgtgcgt
cgtgctttggtcgcatttctgggcattttgctgctttccggtgtattagtcgctaatctt
tatcatctgcaaattgtgcgcgttgatgactaccgcacacgctctaatgagaaccgcatc
aagctggttcctatcgcgccgagtcgcggcatcatctatgaccgtaacggcactccgctg
gcgttgaatcgcactatctatcagttagaactggtacccgacaaagtcgacaaccttaaa
gatacgctcgaagccctgcgccccgtcgtcgacctgaccgatagcgatctggaaaacttt
gaaaaagagcgtaagcgttcacgccgttttacttccatccccgtaaaaagcgggctggat
gagattcaggttgcccgttttgccgtcaaccaataccgtttccccggtgttgaagttaaa
ggctaccagcgccgctattatccttacggctctgccctgacgcacgtcacgggttatgtt
tccaaaatcaccgataaagaagtagaacggctgaccaaagaagaaaagattgccgattac
gccgccacgcgtgacatcggtaagctaggtattgaacgtcattacgaagatctgctgcac
ggcaagcctggctatgaagaagttgaagttaacaaccgtggccgcgtgatccgccagctc
cacgaacagccaccgcaggctggacgtgatatttatctgacgctggatctgagcctgcaa
atctacatcgagaaactgctggaaggcagtcgtgccgccgtgattgtcaccgatccacgc
gacggcggtattctggcgatggtttccacccccagttacgatcccaacctcttcgtcgac
gggatttccaccaaaaattacgcaaaactacaaagcgaccccgatcgtccgctgatcaat
cgcgcaacacaggggatttatccccccgcctccaccgttaaaccttacatcgcggtttcc
gccctgacggcgggcgtgatcaccactaataccagcctgttcgatcccggctggtggcaa
ttacccggttccgagaaacgcttccgcgactggaaaaaatggggacatggccgccttaat
ctcaccaagtcactggaagagtccgcggataccttcttctatcaggtcgcttatgacatg
ggcatcgatcgcctgtccgaatggatgaccaaatttggttacggcgagagaaccggtatc
gatatttcggaagaaagcaaaggcaatatgccaacgcgcgagtggaaattaggccggttc
aaaaagccttggtatcaaggggatacgattccggtcggaattggtcaaggttattggacc
gcaacgcctatccaaatgaataaggcactggtgacgctgatcaacgacggccaggtcaaa
acgcctcacctgctttatagctcgcgggaaaatggcaagattgtgcctttccgccagacc
gagaatcagcaaattggcaacatccactctggctattgggaagtggcgaaggacggtatg
tatggcgtggctaaccgccctaacggcaccgcccacaaaagtttcgatgatgcgccttat
aaaattgcggcaaaatccggtacggcacaggttttcggcctgaaagaaaacgaaacctat
aatgcgcacaagatcgcagaacatctgcgtgaccataaattaatggttgcgtttgccccg
tataaagaccctaaagtagcgatgtcgattattctggaaaacggtggcgcaggcccgacc
gttagcaccatcacccgccagatccttgatcatattctgctaggtgataacaataccgat
ttacccagtgcgcctcctgcgccaccgggtagcgagagtgagtaa
DBGET
integrated database retrieval system
