Pectobacterium parvum: LOZ86_07835
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Entry
LOZ86_07835 CDS
T07916
Name
(GenBank) inverse autotransporter beta-barrel domain-containing protein
KO
K13735
adhesin/invasin
Organism
ppav
Pectobacterium parvum
Pathway
ppav05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
LOZ86_07835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IAT_beta
Big_1
Invasin_D3
Big_2
Filamin
Glyco_hydro2_C5
LysM
HL_N-beta
bMG3
Peptidase_S41_N
Motif
Other DBs
NCBI-ProteinID:
UFK40733
LinkDB
All DBs
Position
1747865..1753123
Genome browser
AA seq
1752 aa
AA seq
DB search
MKDRFKHTHFVPLHLKLLAWMNIGIQVSFPIVAAFTPATAVAGGDDRFLQNQEQIALQTR
VYTLGEGETVSTIAKKYHMTLDALRKLNQFRTFSQGFDHLQQGDELEVPVAPLPEVRWDD
ASVTEEQGNDTHAHKVAGYAAQAGGTLANGAGSDAIASMAQGIVSRAASDEIQQWLGRFG
TARVQLEMDKNFSLKNSQLDLLVPLFEQKDSLVFSQGSIHRTDGRTQSNLGGGYRWFADD
WMLGVNTFLDYDLSRDHSRLGLGGEYWRNFLKLGANIYYRLTGWKTSPELRDYEERPANG
WDVRMQAWVPSLPQLGGKLMYEQYYGDEVSLFGQDSRQRNPHAITAGVNYTPVPLLTFGA
EQRQGQSGKSDTRFSMDMNYQLGVPWQQQVNPDSVAIMRSLVGSRYDLVERNNNIVLEYR
KKKDVILLRTADLVTGYAGEQKPLGVSVTSKYGMERIDWSAPSLIASGGNIVQDGSDWYV
VVPEYSSVREGGNSYTVSGVAVDKKGNISDRADTQVTATQAALDISTSSLSPSSASQPAN
GVSQQKFVLKVNDKEGRPVDIAENEISVVSTSKLRGNINATVSAFTRLVAGEYEMTVTAG
TVPESFTLIPSARNIQFASADVILTADNATAQVDTLDVIEDGAIADGKSNNRFRVTVIDA
HNNSVSGQSIRLKADKGATVAESVITEADGTVIVPITSQQAGDTTVTASIHGRDEKTLTL
TFHPDQNTMRVEQNNLSILPEVSLADGKTPKNVVAKVTDAKGNAVPDVLVTFSTDNGATL
AEKIVKTDAQGVVTTTLVSTIAGPSRVLASINNLTTTKDTTFIGNNATAIVSSVSTDATS
GVADGVTAVTFRALIKDLNGNLLSGIPVDWKSDKNSSIVAFNHAQTLTSKEGIAEVAVTS
TRAYSDVVVTAFTNASSVSASPFIFSAGDVDENRSELALSPSVIVAGKETATLRLTLRDS
KGNLLTGKTVSGISDNSDVNVGESQQNSNTRGRYTMVVSSDKAGTATLSVKVDGQTLNMS
RILTVKGDNDRWKLSSIVSNTASLIAGDRKGATYHATVTDAQGNLLNNVVVSWQLSGQAE
SYEPTSRTNEKGVAITTVRSNTAGLLQMTAYLDADNYAQADGVTVVAGEIKNSTFGADKT
NIGSDGKDSVTLTASLEDSYGNPVTGKILTIEGADSLAGFKLSAVQDQQNGRYVATGTST
TKGKVILSAKVDGKKVGNSVTVTVGAITPDLRFDNAEQPVTWTRSFTASQVVRGMPEGVE
QKWSSSDSRVATVDGNGRVTLLKAGSARISIYTPGNEQYNQSMASYTLSVSRAAPGLKAG
TGNPITAIWADGKEQNITANYTNSDVLDGLTAVYTTKNTAIVTVDNVGKLTAVKPGAATV
TVSTPETDQFLAASADVTYVLNKATADVSFNTTTVKTTDEEAFTLQSPVTSLTPQASIKW
MSSNTNVVSVSGSGTIEGNVGKGQTRLTLTVLANDYYNASSGYYDVMVYTKPSISLGDVS
YISKGSKGSSGTWTPVFTDDSLSVTWSADVSDEFSKPESVTVYILDNNGNELARQTELSP
SGSKTTTVNPNSSLWDKKVHVALIAKGFGKLETNKSSSEVIVRNLEPRQIWTTFTVRSQV
KTMTSQGEDNACQSSAFGRDHWNNAVVTGERVSFGGKTLISPMSVRARVNASQNGSSFSK
EYFPNSYTTVVTNQNINFGTTRIAQNCWRDHTGRYNIDIIVGYNGKTYEYSGLGYGWGGN
GDGMYVDRINDF
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacagatttaaacacacccatttcgtacctcttcatcttaaattgcttgcttgg
atgaatatcggtatccaggtttcttttccgatcgtagcggcatttaccccagcgactgct
gtggcaggaggtgatgaccgcttcctgcagaatcaggaacagattgcgctgcagactcgg
gtatacaccttgggtgaaggggaaacggtttctaccattgcaaagaagtaccatatgact
ctggatgcactgcgcaagctgaaccagtttcgtactttttcccagggttttgatcatctg
caacagggtgatgagctggaggttcctgttgctccgttgcctgaagttcggtgggatgat
gcgtcggtgacagaagagcagggtaatgatacgcatgctcataaagtagctggctatgct
gcacaggcggggggaacactggcaaacggtgcgggcagtgatgctattgcatcaatggca
caaggcatagtctcaagggctgccagcgatgaaattcaacagtggcttggtcgtttcgga
accgcacgagtacaactggagatggataaaaatttctccctgaaaaactcacaactggac
ttgcttgtccctttgttcgaacaaaaggacagccttgtcttcagccagggtagtattcac
cggactgatggacggacccagtcaaatttgggtgggggatatcgttggtttgccgatgat
tggatgctcggtgtaaatacctttctcgactatgatctttctcgagaccattcccgcttg
gggctaggaggggaatattggcgtaattttcttaaactgggtgccaatatctattaccgc
ctgacaggctggaaaacgtcaccggagctgagagactatgaggagcgtccggcaaacggc
tgggatgtcaggatgcaggcttgggtgccttctctgccacagctgggtggcaagctgatg
tatgagcaatactacggggatgaggtgagtctcttcggtcaggatagccgacagaggaac
ccgcatgctatcacggctggcgtaaattacactccggttcctctactgacgtttggtgca
gaacagcgtcaggggcagtcaggtaaaagcgacacgcgtttcagtatggacatgaattac
cagctaggcgtaccttggcagcagcaggtcaatccagactcggtggcgatcatgcgcagc
ttggttggtagtcgatatgacctagtggagcgtaacaacaatatcgttctggaataccgc
aagaaaaaagatgtgatcctcctgaggacggccgatctggtgacgggttacgctggtgag
cagaaaccactcggcgtatcagtaactagcaagtacggtatggaacgtatcgactggtca
gctccgtctctcattgcctcaggaggtaacatcgtgcaggacggcagcgattggtatgtg
gttgtgccggaatatagttctgtcagagagggaggcaacagctatacggtgagtggtgta
gcagtcgacaaaaaagggaacatttccgaccgagctgacactcaagtcacagccacacag
gctgcgcttgatataagtactagttcactctcaccttcgtcagcttcacagcctgctaat
ggtgtttcacaacagaaatttgtgttgaaggtgaatgataaagaagggcgcccagttgat
attgctgaaaatgaaatcagcgttgtgagtacatctaagctgcgcggtaacatcaatgcc
actgtatctgcattcacccgacttgttgcgggtgaatatgagatgacagtaacagcaggc
actgtgcctgaatcattcacgttgataccgtcggctcggaacatacaatttgcgtcagcc
gatgtgattctgactgcagataatgctaccgcacaggttgatacgctggatgtcattgag
gacggcgccattgctgacggtaaatccaataaccgtttccgagtaacggttattgacgcc
cataataactccgtatctggccagtctatcagactgaaagcagacaagggggccactgtt
gcggaatcagtcatcactgaagctgatggtaccgtcattgttccgattacatcacaacag
gctggtgacacaacggttacagccagtattcacggcagagatgaaaagacgctgacgctt
acttttcatcctgaccagaacaccatgagggtagaacagaataatttaagcattcttcca
gaggtctctctggctgacggtaagacaccaaaaaacgtggtagccaaggttaccgatgca
aagggtaacgccgtccctgatgtgctggtcacatttagtaccgataacggtgctacgctc
gctgagaaaatagtaaaaacagatgcgcagggagttgttaccaccacacttgtcagtacc
attgccggcccctcacgcgtgctggctagcatcaataacttgaccaccacaaaagacact
acgttcatcggtaacaatgcgactgccatcgtgagttccgtcagtacggatgcgacctct
ggtgttgctgatggggtaacagctgtgacattcagggcgctgattaaagacctcaacggc
aaccttctttccggtatcccagtggattggaaatccgataagaacagcagcattgtagcc
tttaatcatgcccagacgctgacctctaaggaggggattgctgaagtggccgtgaccagt
acccgtgcatacagtgacgtggtggtgactgcatttacgaacgcatcgtcggtatcagcc
tctccgtttatattcagcgcaggtgatgtggatgaaaaccgctcagagctggcactctct
ccgtcggtcattgttgccgggaaagagacagcaacacttaggctgacgttacgtgatagt
aaaggcaacctgctcactggaaaaacggtcagcggcatcagcgacaacagcgatgtgaat
gttggtgaaagtcagcaaaacagcaatacacgaggccgctataccatggtggtgagcagc
gacaaggcaggcactgccacgctgtcagttaaggtagatggccaaacgttgaacatgagc
cggattctgacagtgaaaggagataacgatcgctggaaactatcctctatcgtgtcaaat
acagccagtctgatagcgggtgataggaaaggagccacataccatgctacggttactgat
gcacaagggaatttactgaataatgtggtggtttcttggcagcttagcggccaggcggaa
agctatgaaccaacgtcacgtacgaatgaaaagggcgtagcgatcacaacggtgagaagt
aataccgctgggctgcttcagatgacagcatatcttgatgcggataattatgcccaagca
gacggtgtcactgttgtagcgggggagattaaaaactctacctttggtgcggataaaacc
aacataggctccgacggtaaggatagcgtaacgctgacagctagcttggaagacagctat
ggcaacccagttacgggtaaaatattgacaatagagggtgctgattccctggcaggcttt
aagctcagtgctgtccaggatcagcaaaacggacgctatgtggcgactgggacctcgaca
accaaagggaaggttattctcagtgctaaggttgacggtaaaaaggtggggaattcagtt
accgttactgtgggagccatcacacctgatttaaggtttgataatgcggagcaacctgtg
acctggacgagaagtttcactgcctcgcaggtcgttaggggtatgcctgaaggtgtggaa
cagaaatggtcgagttcagacagtcgtgtcgccactgttgacgggaacgggagagttacg
cttctgaaagcaggttcggccaggatttctatctatacgccggggaatgagcaatacaac
cagtcaatggcatcatacaccttgagtgtatccagagccgccccaggactgaaagccgga
acaggtaatcccattactgccatatgggctgatggcaaggaacaaaacattaccgccaac
tacaccaacagcgatgtactggatgggctgacggccgtatacacgactaaaaatacagct
attgtcactgtggataacgtcggcaagctgaccgcagtaaaaccaggtgccgcgaccgtc
actgtcagtacgccggaaacggatcagttccttgccgcttcagcagatgtcacatacgtt
ctgaacaaagcgacagcagatgtgagtttcaatacgactactgtgaaaaccacagacgaa
gaagctttcactctacagagtccggttacgtcgctgactccgcaagccagcattaaatgg
atgtccagcaatacaaacgtggttagcgtatccggttcaggaaccattgaggggaatgtt
ggcaaagggcaaacccgactgacgttaacagtacttgctaatgactattataatgccagc
tctggctactacgatgtcatggtgtatacgaagccatccattagtctgggtgatgtctct
tacataagtaaaggaagcaaaggtagctcaggcacatggacgcccgtctttaccgatgat
tcgctttctgttacatggagtgctgatgtctctgatgaattcagtaagcctgagagtgtg
accgtttatattctggataataatggaaatgaactcgccagacagaccgaactgtctcca
tcggggagtaaaaccacgacggtgaacccaaattcttcattatgggataaaaaggtacat
gtggcactgattgctaaagggttcgggaagcttgaaacgaataagtcgtcttcagaggtt
atcgttaggaaccttgaaccaaggcagatatggacgacattcaccgttcgatcgcaagtc
aaaacaatgacctctcagggagaagataatgcatgccaatcatccgcctttggtcgagat
cactggaataatgcagtcgtcactggggaaagagtcagttttggtggtaaaacgctaatt
tctccaatgtcagtgagagctcgtgttaatgcatcccagaatggttcgtctttctcgaaa
gaatatttcccaaatagttatactacggtagtaacaaatcaaaatatcaattttggaact
actcgaatcgcacagaattgctggagagaccatacagggagatataacattgacattatc
gttggttataatgggaagacttacgaatattcgggattgggttatgggtggggagggaac
ggagatggaatgtatgtagatagaataaatgatttttga
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