KEGG   Pectobacterium parvum: LOZ86_08325
Entry
LOZ86_08325       CDS       T07916                                 
Name
(GenBank) lytic transglycosylase domain-containing protein
  KO
K03194  type IV secretion system protein VirB1
Organism
ppav  Pectobacterium parvum
Pathway
ppav03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppav00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LOZ86_08325
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppav02044]
    LOZ86_08325
Secretion system [BR:ppav02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   LOZ86_08325
SSDB
Motif
Pfam: SLT
Other DBs
NCBI-ProteinID: UFK40819
LinkDB
Position
complement(1859891..1860556)
AA seq 221 aa
MLSPTAFMAAVMQCAATIHPSTAFDVAKVESSFNPYAIAEIVPKEERAPDSVGVISHQPT
SKQTAINIIEQVVAKGRRYSVGLMQITSTNFRHYGVTAHDLLDPCTNLSVFERILTDCYQ
RGGTLKRALSCYYSGNFDTGQQPESAFNQTSYIQRIGYAVPSTREDIKRSTTSQSTSEIH
YPATVLRGELTDKATPVLTSLHYPIAILRGDVSLPVINEEK
NT seq 666 nt   +upstreamnt  +downstreamnt
atgctttcacccactgcttttatggcggcggtaatgcagtgtgccgccactattcacccc
tccaccgcgtttgatgtagctaaagtggaatccagctttaacccttacgccatcgctgag
attgtgccgaaggaagaaagagcgcccgatagcgtaggcgtcatttctcatcagcccacc
agcaaacaaactgccatcaacatcatcgagcaggtagtcgcaaaaggccgccgctattca
gtcgggttaatgcaaatcaccagtaccaactttcgccattacggcgtaacagcgcatgac
ttgttagatccctgcaccaatctgtccgtttttgagcgtatcctcaccgattgctaccag
cgaggcggcacgctgaaaagagcactcagttgttactattccggcaatttcgatacgggt
cagcagccagaatccgcctttaaccaaaccagttatatccagcgtattggctatgcggtc
ccgtcaacgcgggaagatatcaagcgcagtaccaccagccaatctacttcagagattcat
tatccggccaccgtcctgcgcggtgagctcaccgataaagccacaccggttttgacctcc
ctgcactatcccatcgccatccttcgcggcgatgtatccctacctgtaattaatgaggag
aaatga

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