Pectobacterium parvum: LOZ86_09320
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Entry
LOZ86_09320 CDS
T07916
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppav03016
]
LOZ86_09320 (cmoB)
Transfer RNA biogenesis [BR:
ppav03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LOZ86_09320 (cmoB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
CMAS
PCMT
Motif
Other DBs
NCBI-ProteinID:
UFK41002
LinkDB
All DBs
Position
complement(2060200..2061183)
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AA seq
327 aa
AA seq
DB search
MIDFGNFYQQIAKGPLSHWLNTLPSQLSSWQQESLHGKFKLWFNSLEHLPSLTPTSLDLN
DSVTARMEPDISIGQREGIEKLLRNLMPWRKGPFSLYGVDINTEWRSDWKWQRVLPHISP
LKNRLILDVGCGSGYHLWRMVGEGATMAVGIDPMQLFLCQFEAVRKLLGDDQRAHVLPLG
IEQLPELAAFDTVFSMGVLYHRRSPLDHLWQLKNQLVAGGELVLETLVIEGDENQVLVPG
ERYAQMRNVYFIPSAAALTKWLEKCGFVDVRVVDICTTTTQEQRRTDWMITESLAEFLDP
EDPTKTVEGYPAPVRAVLVARKPGIYQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatttcggcaatttttatcaacaaatcgcaaaaggcccactcagccactggctt
aacacgctaccttcacagctcagtagttggcagcaggaatcgttgcacggtaagttcaaa
ctctggtttaactcgctggaacaccttccatcgctgacgccaacctctctggatttgaac
gacagcgttacggcgcgcatggaacccgatatttccatcggccagcgtgaaggtatcgaa
aagttgctgcgtaacctgatgccttggcgtaaaggccccttttcgctttacggcgtagat
atcaacacggaatggcgttctgactggaaatggcagcgcgttctgccgcatatcagcccg
ttgaaaaatcgcctgattctggatgtaggctgcggcagcggctatcacctgtggcggatg
gtcggcgaaggcgccacgatggcagtcggcatcgatcctatgcagctgttcttatgccag
tttgaagctgtgcgtaagctgctcggcgacgatcagcgtgcgcacgttctgccgctcggt
attgagcaactccccgaacttgctgcgtttgacactgtgttttctatgggcgtgctgtac
caccgccgttccccgcttgatcacctgtggcaattgaagaatcaactggtggcgggtggc
gaactggtgctggaaacgctggttattgaaggcgatgaaaatcaggtgctggtaccggga
gaacgctatgcacaaatgcgcaatgtgtatttcatcccttctgccgcggccttgacgaaa
tggcttgagaaatgcggctttgttgatgtccgcgtcgtggatatctgcaccacgacaacg
caggaacagcgccggacagactggatgatcacggaatcactggctgaattcctcgatcct
gaagatccgacgaaaacggtggaaggttaccctgcaccagtacgggccgttctggttgcc
cgtaaacctgggatctaccagtaa
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