Pectobacterium parvum: LOZ86_09370
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Entry
LOZ86_09370 CDS
T07916
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOZ86_09370 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_09370 (ruvB)
Enzymes [BR:
ppav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOZ86_09370 (ruvB)
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOZ86_09370 (ruvB)
RecFOR pathway proteins
LOZ86_09370 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_3
TIP49
AAA_14
nSTAND3
Rad17
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
Bac_DnaA
AAA_24
AAA_28
TsaE
NB-ARC
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UFK41011
LinkDB
All DBs
Position
2069801..2070811
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLISADAVPEEEFIDRAIRPKFLTEYVGQPQVREQMEIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNMRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYKVEDLQYIVSRSAQCLGLDLTSEGALEVARRARGTPRIANRLLRRVRDFSEVKSEG
AITGDVATQALDMLAVDTEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRMATQHAYRHFGLTREDVS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttaatttccgctgacgccgttcctgaagaagaatttatcgac
cgtgcgatccgccctaaattcctcaccgagtatgtggggcagccgcaggtgcgtgagcag
atggaaattttcattcaggcggcccgcaagcgcggggatgcgctggaccatctgttaatt
tttggtcctcccggtctgggtaaaacgacgctggcgaacatcgttgctaacgagatgggc
gtgaatatgcgcacgacgtcaggcccggtactggaaaaagccggcgatctcgccgcgttg
ctgaccaatctcgaaccgcatgacgtactgttcattgatgaaattcatcgcctgtcaccc
gttgtggaagaagtgctgtatccggcgatggaagactatcagttggatatcatgatcggc
gaagggccggccgcccgttcgatcaaactcgatttgccgccttttacgctgattggcgca
acaacgcgtgcaggttcgttaacttcaccgctgcgcgatcgtttcggcattgtgcaacgt
ttggagttttataaagttgaggatttgcagtatatcgtcagccgcagcgcacagtgttta
gggcttgatctgacatctgagggcgcgcttgaagtagcgcggcgcgcgcggggtacgccg
cgtattgccaaccgattattacggcgggtgcgcgatttctccgaggttaaatcggaaggg
gcgattaccggtgacgtggcgacgcaagcgctggatatgctggcggtggataccgaaggc
tttgactatatggaccgcaagctgctgttggcgatcatcgataaattcatgggcggcccc
gtcgggctggacaatttagcagccgcgattggcgaagagcgcgaaaccattgaagacgtg
ctggaaccgtttctgattcagcaagggttcattcagcgtacgcctcgcggtcgaatggcg
acgcagcatgcctatcgtcattttggtttaacgcgtgaagacgtgagctaa
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