Pectobacterium parvum: LOZ86_09510
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Entry
LOZ86_09510 CDS
T07916
Name
(GenBank) PD40 domain-containing protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00040
Pentose and glucuronate interconversions
ppav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LOZ86_09510
Enzymes [BR:
ppav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
LOZ86_09510
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
UFK41034
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All DBs
Position
2104430..2105596
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AA seq
388 aa
AA seq
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MAKGNKIPLTFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPW
NYYLLDLKEQSAMQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRVDLITGEA
ETILQENQWLGHPIYRPSDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESC
THEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVGD
GSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTP
DNKQVLFTSDVDGKPALYLAKVPDSVWN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaacaagatccccctaacgtttcatacctaccaggattcagcaaccggc
accgaagttgtgcgtttaaccccgcccgatgttatctgccaccgcaactatttctatcag
aagtgtttcttcaatgacggcagcaagctgctgtttggcgctgcgtttgatggcccgtgg
aattactatctgctggatttaaaagagcagagcgccatgcagctgacggaaggcaaaggc
gacaacaccttcggtggtttcctgtctccgaatgacgatgcgctgtattacgttaaaaat
acccgtaatctgatgcgtgtcgatctggctacgctggaagagaaaacgatttatcaggtg
cctgacgattgggtcggctacggtacctgggttgccaactccgattgcaccaaaatggtc
ggtattgagatcaaaaaagaagactggaaaccactgaccgattggaaaaagttccaggaa
ttctatttcaccaatccttgctgtcgtctgattcgcgtcgatttgataacgggcgaagca
gagactatccttcaggaaaaccagtggctgggtcacccaatctaccgtccgagtgatgac
aacacggttgcgttctgccacgaaggtccgcatgacctggttgatgcgcgtatgtggttc
atcaatgaagatggcaccaacatgcgtaaagtgaaagagcatgctgaaggcgaaagctgc
acccacgaattctgggttccagatggttcagcgatgatttacgtctcttaccttaaagac
gataccaatcgctacatccgcagcatcgacccggttacgttggaagatcgccaactgcgc
gtcatgccgccgtgttctcacctgatgagtaactatgatggtacgctgttggtcggcgat
ggttccgatgcgccagtcgacgtgcaggacgatggcggctataaaattgagaacgatcca
ttcctgtatgttttcaatctgaaaaccggcaaggaacatcgcattgcacagcacaataca
tcctgggaagtgctggaaggtgaccgtcaggttactcacccgcacccgtctttcacgccg
gataataaacaagtcctgtttacttctgacgtagatggaaaacctgcgctgtatttggca
aaggttcctgattcagtctggaactaa
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