Pectobacterium parvum: LOZ86_09530
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Entry
LOZ86_09530 CDS
T07916
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOZ86_09530 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppav01007
]
LOZ86_09530 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppav03016
]
LOZ86_09530 (thrS)
Enzymes [BR:
ppav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
LOZ86_09530 (thrS)
Amino acid related enzymes [BR:
ppav01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LOZ86_09530 (thrS)
Transfer RNA biogenesis [BR:
ppav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LOZ86_09530 (thrS)
Prokaryotic type
LOZ86_09530 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
UFK41038
LinkDB
All DBs
Position
2108836..2110764
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AA seq
642 aa
AA seq
DB search
MPVITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQLAII
TAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELL
EKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISRDDRPGLYHHEEYID
MCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRVYGTAWADKKQLASYLQRLEEAS
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMD
RVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGS
CHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKL
STRPEKRIGSDEMWDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPV
QAVIINITDSQSDYVNELTRKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKE
VEAGKVAVRTRRGKDLGSLDVSEVISKLQQEIRSRSLHQLEV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccagttatcactcttcctgatggaagtcagcgtcattacgaccacgccgtttctccc
ctcgatgttgcacttgatattggtcccggtctggcaaaagcctgtatcgcaggacgtgtc
aatggcgaactggttgatgccagtgataagatcgataccgatgcgcagttagccatcatc
accgctaaagatgaagccggtctggaaattattcgccactcctgtgcgcacctactgggc
catgcgattaagcaactgtggccagataccaaaatggcgattggtccagttatcgataac
ggtttttactatgacgttgatatcgaccgtaccctgactcaggaagatattgagctgctc
gaaaagcgtatgcacgaacttgctgacactgactatgacgtcattaagaaaaaagtcagc
tggcaggaagcgcgcgatgcgttcgctgcacgcggcgagacctacaaaattgcgattctg
gatgagaacatcagtcgagacgatcgtccgggtctgtatcaccatgaagaatacatcgat
atgtgccgtggtccgcacgtaccgaatatgcgtttctgccaccatttcaaattgcagaaa
acgtccggcgcttactggcgtggcgacagcaaaaacaaaatgctgcaacgcgtttacggc
actgcatgggcagataaaaagcaactggcttcttacctgcaacgtcttgaagaagcgtct
aagcgcgaccaccgcaagatcggcaaacagcttgacctgtaccatatgcaggaagaagca
ccaggtatggtgttctggcacaacgacggctggacgatcttccgcgagctggaagcgttt
gtacgcatgaagctgaagtcgtaccagtatcaggaagtaaaaggtccattcatgatggat
cgcgtgatgtgggaaaaaacgggccactgggaaaactacaaagaagcgatgttcacgacg
tcatcagaaaatcgtgaatactgcatcaagccaatgaactgcccaggccacgtacagatt
ttcaatcagggattgaaatcataccgcgatctgccgctgcgtatggccgagttcggtagc
tgtcaccgtaatgaaccgtcaggctctctgcatggcttaatgcgcgtgcgtggcttcact
caggacgatgcgcacatcttctgtacggaagagcaggttcgtgatgaagtgaacagctgc
atcaaaatggtgtatgacatgtacagcaccttcggttttgaaaaaatcgtggtgaaactg
tctacgcgtcctgaaaaacgtattggtagcgatgagatgtgggatcgcgctgaggccgat
ttggctgccgcgttgactgaaaataacatcgaattcgcctatcagccgggtgaaggggcg
ttctacggcccaaaaattgaatttaccttgcatgactgtttggatcgtgcgtggcagtgt
ggtacggtgcaactcgacttttcattaccgggtcgtctgaacgcgtcttacgttggcgaa
agcaacgagcgtcaggttccggttatgatccaccgggctattttgggatcaatggagcgt
tttatcggtattctaaccgaagaattcgccggtttcttcccgacctggttagccccggtt
caagcggtgattataaatatcaccgatagccagtctgattatgtcaacgaattgacccga
aaactgcaagaagcgggcattcgtgtaaaagcagacttgagaaatgagaagattggcttt
aaaatccgcgaacacactttacgacgtgttccctatatgctggtttgtggcgacaaagaa
gtcgaggcaggaaaagttgctgtccgtactcgtcgcggtaaagacctggggagcttggac
gttagtgaagtcatcagtaagctgcaacaagagattcgcagccgtagtcttcatcaattg
gaggtataa
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