Pectobacterium parvum: LOZ86_09610
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Entry
LOZ86_09610 CDS
T07916
Name
(GenBank) oligogalacturonate-specific porin KdgM family protein
KO
K22110
oligogalacturonate-specific porin family protein
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_09610
Transporters [BR:
ppav02000
]
Other transporters
Pores ion channels [TC:
1
]
LOZ86_09610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdgM
Porin_4
OMP_b-brl
DUF2490
DUF3078
Motif
Other DBs
NCBI-ProteinID:
UFK41052
LinkDB
All DBs
Position
complement(2124656..2125378)
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AA seq
240 aa
AA seq
DB search
MKFKLLALAVTSLISVNAMAVTIDYRHEMKDTPKNDHRDRLSISHRFDNGFGLSAEAKWR
QANNDNTPNKPFNETVSNGTEVVASYVYKINKTFQIEPGFSLDSSSTSNNYRPYLRGRAA
VTDDFSVSFRYRPYYLRNSGLNIGKANSDPSVEKGYNLTTVLSYKFLKDFQVDYELDYKK
ATKAGKTLYDNDNDNFDHDVKLSYKWDKNWKPYTAVGNVAEDGKTDRRQTRFRVGVQYSF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaattattagctctggctgttacgtcattaattagtgtgaatgcaatggcg
gtgacaattgattatcgtcatgaaatgaaagacacaccaaaaaatgatcatcgcgatcgt
ttgtcaatatcacaccgttttgataacggctttggcctttctgccgaagcaaaatggcgt
caggcaaataacgacaacacgccgaataaaccatttaatgaaaccgtcagcaatggtaca
gaagtggttgccagctatgtgtataaaattaacaaaaccttccaaattgaacctggtttc
tctttagattcaagttctacttctaacaactaccgtccttatttgcgtgggcgtgcggca
gttactgatgatttttctgtttctttccgctatcgcccatactatttaagaaacagtgga
cttaatattggaaaagcaaacagtgacccttccgttgaaaaaggttacaatttaacaact
gtattaagttataaattcctgaaagattttcaagttgattatgagttagattataaaaaa
gcaactaaagctggaaaaacactctacgacaacgataatgataatttcgatcacgacgta
aaactttcttataaatgggataaaaactggaaaccatatacggctgtaggtaacgtagct
gaggatggaaaaacagatcgccgtcagactcgtttccgtgttggtgtgcaatacagcttc
taa
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