Pectobacterium parvum: LOZ86_09635
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Entry
LOZ86_09635 CDS
T07916
Name
(GenBank) pectate lyase
KO
K01731
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00040
Pentose and glucuronate interconversions
ppav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LOZ86_09635
Enzymes [BR:
ppav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
LOZ86_09635
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
UFK41057
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All DBs
Position
complement(2129916..2131547)
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AA seq
543 aa
AA seq
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MSIFESLYTSRKSQLDEWVAALDSHITCVQDKGRSQTKPTLLLADGFDVKNYAPVVWQFP
DGHTAPISNFASQQNWLRTLCAMSVITGNDNYQQQAIAQSEYFLDHFVDDNSGLFYWGGH
RFINLDTLEGEGPESKAQVHELKHHLPYYALLHRVNAKKTLNFFQGFWNAHVEDWDSLDL
GRHGDYSKKRNPDVFQHARHDVVDPAQWPVLPLTKGLTFVNAGTDLIYAAFKYAEYTGDS
QAAAWGKHLYRQYVLARNPETGMPVYQFSSPQQRQPVPEDDNQTQSWFGDRAQRQFGPEF
GEIAREANVLFRDMRPLLIDNPLAMLDILRTQPDAEMLDWVISGLKNYYQYAYDVTSNTL
RPMWNNGQDMTGYRFKRDGYYGKAGTELKPFALEGDYLLPLVRAYRLSGDEDLYALVNTM
LTRLNKEDIQHIASPLLLLTVIELADHKQSESWAHYAAQLAGVLFEQHFHRGLFVRSAQH
RYVRLDDSYPLALLTFVAACRNKLNDIPPYLTQGGYVHGDFHVNGENRIVYDVELIYPEL
LTA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttttgaaagcttatacaccagcaggaaatcgcagctcgacgaatgggttgct
gcacttgatagccacattacctgcgttcaggataaaggccgcagtcaaactaagccaacg
ttattattggccgacggctttgatgtgaaaaattatgcacctgtagtgtggcaattccca
gatgggcacaccgcacctatttctaattttgccagccagcaaaattggttgagaacgcta
tgcgcgatgagcgtgattacgggtaatgataattaccagcagcaggctatcgcacagagc
gaatattttctggatcatttcgttgatgataatagtggcctgttctactggggtggtcac
cgttttattaatctcgatacgctggaaggcgaagggccagaatccaaagctcaggtgcat
gaattaaagcaccacctgccttattacgcgctgctgcatcgtgttaatgcgaaaaagaca
ctgaacttctttcaggggttctggaacgcgcacgttgaagactgggattcactggatcta
ggtcgccatggggattacagcaaaaaacgcaatcctgatgttttccagcatgcacgccat
gatgttgtcgatccggcacagtggcctgttctaccattaacgaaaggactgacctttgtt
aatgcgggtacagatctgatttacgccgcgttcaaatacgcagaatacacgggcgatagc
caagcagccgcatggggtaagcacctttatcgccaatacgttctggctcgtaacccagaa
accggaatgcctgtgtatcagttcagctcaccacagcagcgccagccggtgccggaagac
gacaaccagacgcagtcctggtttggcgatcgcgcccaacgccagtttggcccagagttc
ggtgaaatcgcgcgtgaagccaatgtgctgttccgtgatatgcgcccactgctgattgat
aacccactggcaatgctggatattctccgcacacagcctgatgcagaaatgctggactgg
gttatttcagggttaaaaaattactatcagtacgcctacgatgtcaccagcaatacattg
cgcccgatgtggaacaacggccaggacatgacaggctaccgttttaaacgcgatggctat
tacggcaaagcgggtacggaattaaaaccgtttgcattagaaggtgattatttattaccg
ctggttcgtgcttatcgtctgagtggcgatgaggacctgtacgctctggttaacaccatg
ctaacgcggctgaacaaagaagacattcagcacatcgccagcccgttactcttgttgacc
gtcattgaactggccgatcacaaacaatcagaatcctgggcacattacgccgcgcagttg
gctggcgttttgtttgaacaacacttccatcgtggtttgttcgttcgctccgcacagcat
cgttatgttcgtctggatgatagctatccgctggctttactgactttcgttgccgcttgt
cgcaacaaattaaacgatatcccgccgtatctgacacaaggtggatatgttcacggtgat
tttcacgttaacggggaaaatagaattgtttatgacgtggaattaatttatccagagtta
ttaacagcttaa
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