Pectobacterium parvum: LOZ86_13040
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Entry
LOZ86_13040 CDS
T07916
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_13040
Transporters [BR:
ppav02000
]
Other transporters
Pores ion channels [TC:
1
]
LOZ86_13040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UFK37898
LinkDB
All DBs
Position
complement(2902539..2904668)
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AA seq
709 aa
AA seq
DB search
MKGNSLINLKNAVALALVATATNTAIAADKNDVLVVTASGYEKKLTNAPASISVISEEEL
SQKSYHDLGEALSGVEGVDVRSGTGKTGGLDISIRGMPSSYTLILIDGVRQNASGDITPN
GFGTMNTAVIPPLASIERIEVIRGPMSTLYGSDAIGGVVNIITKKDSKQWRGNVNLSHSV
QEHRKWGDGSTLGIYASGPLANDKLSLAVRGNLEHRQGSSVTSLSDSGDTRVPFPTKTDN
YNVGAKLSAKTSDANTLWVDGDVSRQTYDNYNSQLGPVGVGGGGYRDELRYERNKLAIGH
DTDLSFGRWSSNLSYAVTENTGRVLTPSVLSPANVGLSGQDRELKNTNTIFDTSLVSPLG
DSHLLTVGGQYWDARVKDGIVLANTGETFEQKSWSLYAEDDWQLLDPLTLTLGARYEKHD
SFGGHLSPRAYLVWNVADDWTVKGGVSTGYKVPSLAQLHNGVSGVGRNGAASTIGNPNLK
PEESTNIETGVYYENDASVKANITGFVNHYKNAISSVEVTPSVGSFRNIGKARTQGVELA
TSFPVFVPELTLGLNYTYTHSEQIGGNNPGAALTTTAKHMANARLNWQLDEQWNTWLAAE
YRAKTPRFTDNYANLNDAQKLVYNDRGTDLKAWTVVNLGASYKVTKNVTLNGTVNNLLDK
DFSDVHPYTATVNGRSTTYYAGDYFGNSAFTTGYVMPGRNYWLSVNVNF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaattctctgattaatctcaagaatgcagtggcgttggctctagtggcaaca
gcaacaaacacagcgatagcagcagataagaatgatgtactggtggtcaccgccagtggt
tatgagaagaaactgaccaatgcgccagcctctatttctgtcatcagcgaggaggagctc
tctcagaaaagttaccacgatctgggtgaagcactgagcggggtagaaggcgtagatgtg
cgcagtggcacgggaaaaactggcggattggacatcagcattcgtggtatgccaagcagt
tacaccctgatcctgattgatggtgtgcgtcagaatgccagcggtgatatcacgcctaat
ggctttgggacgatgaatacagcagtaataccgccgttggcctctattgagcgtattgaa
gttatccgcgggccaatgtcgacgttatatggttctgatgcgatcggtggtgtggttaac
atcattaccaagaaagacagtaaacagtggcgtggcaacgttaacctgtcacattctgtg
caggaacaccgtaaatggggcgatggctccacgctggggatctatgcttccggaccattg
gctaatgataaattaagtctggcggtgcgcggtaatcttgaacaccgtcaaggctcgagt
gtgacgtcactaagcgatagtggtgatacgcgagtaccgttcccgacgaaaaccgataac
tacaatgtcggtgctaaattgagtgcgaagaccagtgatgcgaataccctgtgggttgac
ggcgatgtatcacgtcagacttacgataactataacagccagcttgggcccgttggtgtt
ggtggtggcggatatcgtgatgagcttcgctatgagcgtaataaactggcgatagggcat
gataccgatttgtcgtttggccggtggagctccaacctgtcttatgccgtcactgaaaat
acaggtcgagtgctaacacctagcgtattgagtcccgctaacgtgggtttatccggccaa
gatcgcgagctgaaaaataccaacacgatattcgataccagcctagtttcccctcttggc
gatagccacctgctgactgttggcggtcaatattgggatgcgcgtgttaaagacggcatt
gtgctggctaacacgggtgaaacatttgagcagaagagctggtcactctatgcggaagat
gactggcaattactcgatccgctaacgctgacgctgggtgctcgttatgaaaaacacgat
agctttggcggacacctcagcccacgcgcttatctggtatggaatgtggcggatgactgg
acggtaaaaggaggtgtcagcacgggatacaaagtaccttcgcttgcacagttgcataac
ggcgtcagtggtgtgggaaggaatggggcagcgagtaccattggtaatccgaatctgaaa
ccggaagaaagtaccaacattgagaccggtgtgtattatgagaatgatgcgagcgtaaaa
gccaacatcacggggtttgtgaaccactataagaatgctatttcctcagtagaggttacg
ccttcagtaggaagtttccgtaacattggtaaagccagaacacagggcgttgagcttgca
acatcctttccggtatttgtaccagaactgactctaggcctgaattacacctatacgcac
agcgaacagattggcggtaataatccgggggcggcattgacgacaacggccaagcatatg
gctaatgcccgcttgaactggcagctcgatgagcagtggaatacgtggttagccgctgaa
tatcgcgctaaaacacctcgctttaccgacaattatgcgaatctgaatgatgcacaaaag
ctggtatataacgatcgtggcaccgatcttaaagcatggactgttgtgaatctcggtgcg
tcttacaaagtcacgaaaaacgtgacattgaatggtacggtaaacaatttactggataag
gacttctcagatgtgcatccttataccgctaccgtaaatggtcgctccactacttactat
gctggtgattactttggaaacagtgcttttacgacgggctatgtcatgccaggtcgtaac
tactggctatcggtaaacgtcaacttctga
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