Pectobacterium parvum: LOZ86_15035
Help
Entry
LOZ86_15035 CDS
T07916
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOZ86_15035 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_15035 (xseA)
Enzymes [BR:
ppav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LOZ86_15035 (xseA)
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LOZ86_15035 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6594
Motif
Other DBs
NCBI-ProteinID:
UFK38249
LinkDB
All DBs
Position
3348345..3349739
Genome browser
AA seq
464 aa
AA seq
DB search
MSQFPSSAIFTVSRLNQTVRQLLEMEMGQIWLSGEISNLSQPSSGHWYFTLKDERAQVRC
AMFRTSNRKVTFRPQNGQQVLIRASITLYEPRGDYQLLAESMQPAGDGLLQQQFEQLKHR
LAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPTSVQGAE
APLQIVRAIELANQRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRNREFTRLH
HRLQQQHPQLRLARQQAQLVKLRQRLDDAMQQQLRQTSRRSERLQQRLMQQQPQTRIHRA
QQRLQQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNV
AQISPGETLKTRLQDGWVESQVTTLAPNPNSAKKRRKPSSPTPK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatttccctcctctgcaatttttaccgttagccgcctgaatcagacggtcaga
caactgttggaaatggaaatgggccagatttggctctccggcgaaatctccaacctctct
cagccctcatccggccactggtatttcacgctaaaagacgaacgtgcacaggtacgctgc
gcgatgttccgtaccagcaaccgcaaagtgacgttccgcccgcaaaacggtcagcaagtg
ctgattcgggcgagcattacgttgtatgaaccccgtggcgactatcagctactggcggaa
agcatgcagcccgctggtgatggcctgctacagcagcagtttgaacagctcaagcaccgc
ctcgctgccgaagggctgttcgaccaacagtttaagcaggttctgccctctcccgccaaa
caggtcggcgtgattacgtcagccagcggtgccgccctgcacgatatcttgcaagtgttg
cagcgccgtgatccgtcactaccagtgattgtgtatcccacgtcggtgcaaggtgcggaa
gcgccgctacagatcgttcgcgctattgagctggctaaccagcgggatgagtgtgatgtg
ttaatcgtcgggcgcggcggcggttcgctggaagatctctggagctttaatgacgaacgg
gtcgcccgcgcgattttcgccagccgcattcctatcgtcagcgccgtcggccatgaaacc
gatgtcaccatcgccgatttcgtcggtgacctgcgcgcacccacgccgtccgccgctgcc
gagttagtgagtcgtaaccaacttgagctattgcgtcagatacagtcccagcgccagcgc
ctggaaatggcgatggattattaccttgcccagcgcaatcgggaatttacccgcctgcac
caccgattacagcagcagcatccgcagctgcgactggcgcgtcagcaggcacagctggtt
aaactgcgtcagcggttggatgacgccatgcagcagcagctccggcagacctcgcgccgg
agtgaacgcttacaacagcgtctgatgcaacagcagccgcagactcgtattcatcgagcg
cagcagcgtttgcagcagcttagctatcagatgcaaagtgcagtagaacgtcagttgaat
cagaacaagcaaaagctaggcatcgcctgttcgcgattggaaggcgttagcccgctggcg
acgctggcgcgtggctataacgtcaccaccgccccggacggtaaggtgctgaaaaacgtc
gcgcaaatttcccccggcgaaacactgaaaacccgcttgcaggacggctgggtagaaagc
caggtcacgacgctggctccgaatccaaattccgcgaaaaagcggcgaaaaccctcatct
ccgacgccaaaataa
DBGET
integrated database retrieval system
