Pectobacterium parvum: LOZ86_15080
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Entry
LOZ86_15080 CDS
T07916
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOZ86_15080 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppav01007
]
LOZ86_15080 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppav03016
]
LOZ86_15080 (hisS)
Enzymes [BR:
ppav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
LOZ86_15080 (hisS)
Amino acid related enzymes [BR:
ppav01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LOZ86_15080 (hisS)
Transfer RNA biogenesis [BR:
ppav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LOZ86_15080 (hisS)
Prokaryotic type
LOZ86_15080 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
UFK38258
LinkDB
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Position
complement(3356652..3357926)
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AA seq
424 aa
AA seq
DB search
MAKNIQAIRGMNDYLPAETALWQRIENSLKQVLSGYGYNEIRLPIVEQTPLFKRAIGEVT
DVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYVGPMFRYERPQKG
RYRQFHQLGCEVFGLQGPDIDAELILMTARWWRVLGIADHVKLELNSIGSLDARSRYREA
LVAFLEQHKDQLDEDCLRRMYTNPLRVLDTKNPQIQVLLNDAPVLTDYLDDESRAHFEAL
GELLTQSGIPYTVNPRLVRGLDYYNRTVFEWVTTSLGAQGTVCAGGRYDGMVEQLGGHAT
PAVGFAMGLERLVLLVQSVNPDFKAQSGVDAYLISSGAGTQVAAMQLAEKLRDALPQLKL
MTNYGGGNFKKQFARADKWGARVALVLGENEVAAGQVVVKNLSNGEQDTLAQADVASRLA
TLLD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaatattcaagccatccgtggcatgaacgattacctgccagccgaaacggca
ttgtggcagcgtattgaaaacagcctgaaacaggtgctcagcggctacggctataatgaa
attcgtttgccgattgtcgagcaaacgccgctgtttaagcgcgctatcggtgaagtgacc
gatgtcgtcgaaaaagagatgtatacctttgatgatcgcaatggcgatagcctgactctg
cgcccggaagggacggcaggctgcgtccgcgccggtattgagcacggtattctctataat
caggaacagcggctgtggtatgtcggcccgatgttccgctacgagcgtccgcagaaaggg
cgctatcgccagttccatcagttgggctgtgaagtgtttggtctgcaagggccggacatt
gatgccgaactgatcctgatgacggctcgctggtggcgtgtgctgggcatcgccgaccac
gtgaagctggaactgaactcgattggttcgttagatgcacgctcgcgctatcgcgaagcg
ctggtggcgttcctcgaacagcataaagatcagctggatgaagactgcttgcgccggatg
tacaccaacccgctgcgcgttctggatacgaaaaatccgcagattcaggtgttgctgaat
gacgcgccagtgctgacggactatctggatgatgaatcacgtgcacactttgaagcgctg
ggtgaacttttaacgcagtccggcatcccatataccgttaatccgcgcctggttcgtggt
ttggattactataaccgcaccgtatttgagtgggtgacgaccagtctgggcgcgcagggc
acggtctgtgccggtgggcgttatgatggtatggtggaacagctgggcgggcacgcgacg
ccagcggtcggttttgcgatgggtctggagcgtctggttctgctggtgcagtctgtcaat
ccagatttcaaagcacagtcaggcgtagatgcttatctgatttcttctggtgcgggaacg
caggttgcggcaatgcaactggcggagaaattacgtgacgcgctgccgcagttgaaactg
atgaccaactacggtggtggcaactttaagaagcaatttgctcgtgctgataaatggggc
gcacgcgtcgcattggtattaggcgaaaatgaagtggcggccggtcaggttgtggttaaa
aacctgagcaatggcgagcaggatacattggcacaggccgacgtcgcatcgcggctggca
acgttactggattga
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