Pectobacterium parvum: LOZ86_15545
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Entry
LOZ86_15545 CDS
T07916
Name
(GenBank) SmdA family multidrug ABC transporter permease/ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppav
Pectobacterium parvum
Pathway
ppav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOZ86_15545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_15545
Transporters [BR:
ppav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LOZ86_15545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
T2SSE
AAA_29
AAA_22
AAA_23
AAA_16
NB-ARC
nSTAND3
AAA_33
NPHP3_N
TsaE
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
UFK38343
LinkDB
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Position
complement(3463402..3465171)
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AA seq
589 aa
AA seq
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MRLFAQLSWYFRREWRRYLGAVALLIAIAILQLLPPKLVGVIVDGVTQHGMSMTEMMKWI
GVMLLTAVMVYLLRYVWRVFLFGASYQLAVELREDFYRQLSRQHPAFYQRHRTGDLMARA
TNDVDRVVFAAGEGVLTLVDSMVMGCAVLVVMCTQISWELTLLALLPMPVMAIFIKRYGT
QLHNRFKSAQAAFSSLNDQAQEGLTSIRMIKAFGLENYQSARFAQVAADAGAKNMHVARV
DARFDPTIYIAVGLSNLLAIGGGSWMVINGSLTLGLLTSFVMYLGLMIWPMLALAWMFNI
VERGSAAYSRIRQLLAEELVVKDGEESLPAERGVLEVNISAFRYPDNTRDALQHIQFTLA
PGNMLGLCGPTGSGKSTLLALILRHFDAQSGEIRYHDRPLSAIRLDELRNRFAVVGQMPF
LFSDTVAQNIALGRPDATQQEIEEAARLASVHDDILRLPQGYQTEVGERGVMLSGGQKQR
IAIARALLLDAEILVLDDALSAVDGRTEHQILQNLKTWGEKRTVIISAHRLSALTEANEI
VVLQQGQTVQRGTHRTLAAQPGWYRDMYRYQQLEAALDDVPQLEGTKNE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgagactgtttgctcaactgagttggtattttcgccgcgaatggcggcgctatctgggt
gctgttgcgctattgattgcgattgcgattctgcaattgctgccccctaaactggtcggc
gtgattgtcgatggtgtaacgcagcacggcatgtcgatgaccgaaatgatgaagtggatt
ggcgtgatgctgctgactgccgtcatggtctatctgctgcgctatgtgtggcgagtgttc
ttgtttggtgcgtcataccagttggcggttgagctacgagaggatttttaccgccaactg
agccgccagcatccggcattttatcaacgtcaccgaactggcgatctgatggcgcgagcg
actaacgatgttgatcgcgtggtctttgccgccggagagggcgtgctgactctggtcgat
tcgatggtgatgggttgtgccgtgctggttgtcatgtgtactcaaatcagttgggaactg
accctgctggcgctgcttccgatgccggtcatggcgattttcatcaaacgttatggcacc
caattgcataaccgttttaaatccgcacaggccgcgttttcttcgcttaacgatcaggcg
caggaaggtttgaccagcattcgaatgattaaagccttcgggttggaaaactatcagtcc
gcgcgttttgcgcaggttgcggcagatgctggtgccaagaacatgcacgttgcccgagtt
gatgcccgctttgatcccacgatttatattgccgtcgggctgtcgaatttgctggcgatt
ggtggcggcagttggatggtgattaacggttcgctgacgttaggcttgttgaccagcttt
gtcatgtatctggggttgatgatctggccgatgctggcgctggcctggatgtttaatatt
gttgagcgtggtagcgcggcatatagccgtattcgacagctgcttgcggaagagctcgtg
gtgaaagacggtgaggaatcattacctgccgagcggggtgtgcttgaggtgaatatctcc
gcgtttcgctacccggataatacccgtgatgctttacaacatattcagtttacgctggca
ccgggcaatatgctggggctatgtggaccgacaggatcgggaaaaagtacgctgctggcg
ttgatattgcgtcatttcgatgcccagtcgggagagattcgttatcacgatcgtccattg
agcgctattcggttggatgaactgcggaaccgttttgccgttgtggggcaaatgcccttt
ttgttttccgatacggtggcgcaaaacatcgcactgggtcggcctgatgctacccaacaa
gagattgaagaagcggcacggcttgccagcgtgcatgacgacattctgcgtttgcctcag
ggttatcagacagaggtcggagagcgcggcgtaatgctatcaggcggtcaaaaacagcgg
atcgcgattgcccgtgcattattgctggatgctgaaattctggtgctggacgatgcgttg
tctgcggttgatgggcgaacggaacaccagattttacagaatctcaaaacatggggtgaa
aaacggacggtgatcattagcgcacaccgcctgtcggccttaaccgaagcgaatgaaatt
gtggtgttgcagcaaggacaaacggtgcagcgtggtacacaccggacgctggcggcacaa
cctggctggtatcgggatatgtaccgttatcaacagctggaggcggcgctggatgatgtg
ccgcagttggaaggaacgaaaaatgaatag
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