Pectobacterium parvum: LOZ86_15795
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Entry
LOZ86_15795 CDS
T07916
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_15795 (sbcD)
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOZ86_15795 (sbcD)
Archaeal homologous recombinant proteins
LOZ86_15795 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UFK41380
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All DBs
Position
3518319..3519557
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AA seq
412 aa
AA seq
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MRIIHTADWHLGQYFYTKSRAAEHQAFLNWLIVQVEQHQVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVALQRTGCQLIVLGGNHDSVAMLNESRELLACLNTRVIACASDDPAQQVLLLE
NRQRQPGALLCAIPFLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGATASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTQSEH
IRYSGSPIPLSFDELNSEKSVCLVSFAPDTSPQTPPQIDILPIPMTQPMQLIKGSLSDIE
KQLATFQNYQGDKPVWLDIEINTQDYLSDMQKRIQAMTENLPVEVLLLRRTREQRLQAIT
RQDKETLNELSVHDVFERRLATETDMEDSRQQRVRTLFNQVIDELENSETAK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttagggcaatatttttataccaaaagtcgc
gctgctgagcatcaggcttttctaaactggcttatcgttcaggtggaacaacatcaggtc
gatgccattatcgttgctggcgatatttttgataacggctcgccccccagctatgcgcgg
gaaatgtattatagcttcgtggtcgcgctacagcgcacaggctgccagctcatcgttctc
ggtggtaaccacgattctgtcgcgatgctaaacgaatcccgcgagctgcttgcctgcctg
aacacacgggtgattgcctgcgccagcgacgatccggcccaacaggtgcttctgctggaa
aaccgtcagcggcagcccggtgccctgctctgtgcaattccttttttacgtccgcgtgat
gtattgaccagcaaagccgggcaatccggggatgaaaaacagctggcgctacaggaagcg
attaccgcgcactaccagcagtgttaccaactggcttgccaaaagcgcgacgagcttggc
ctgccgctgccgattatcgcaaccgggcacctgacgacgattggcgcaaccgcctcggaa
tccgtgcgcgatatctatattggtacgctcgatgccttccctgctcaggcttttcctcct
gcggattatatcgcgctcggccatattcaccgcccacagcgcgtgacccaaagcgagcac
attcgctacagcggttcgcccatcccgttgagttttgatgaactaaacagtgaaaaatcc
gtttgtctggtgagctttgcacctgacacgtcaccgcaaacacctccgcagatagacatc
ctgccgattcccatgactcagccgatgcagctgattaaaggcagcctgagcgatattgaa
aaacagctggccaccttccagaactatcagggcgataaacccgtgtggttggatattgaa
atcaacacgcaggattatctgagcgacatgcaaaaacgcattcaggcgatgaccgagaac
ctgcccgtggaggtgttgctgctgcgccgcacgcgtgaacagcgcctgcaggcgattacc
cgacaggacaaggaaacgctgaacgaactgagcgtacatgacgtttttgaacgtcgtctg
gcaacggagacagacatggaagacagccgccagcagcgtgttcgcacgctgtttaatcag
gttattgatgaactggaaaatagcgagacggccaaatga
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