Pectobacterium parvum: LOZ86_15800
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Entry
LOZ86_15800 CDS
T07916
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_15800
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOZ86_15800
Archaeal homologous recombinant proteins
LOZ86_15800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
TMF_TATA_bd
SMC_N
cobW
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UFK38391
LinkDB
All DBs
Position
3519554..3523237
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISERVYDKHKQANVALNTLQARASGIQLLTDDQRQQVEEQLAELIQQEQRGNVERE
QALTTLRWFEQLTQQHAQLANTQAQHASAESAIQQAKPQLDRLTHSEPAEKLRPLHQERE
RYRQESLTLAQRIEQLTGKQAAEQVMLTALRQQEEKAELEVSEHKRVRQQQEQVINEQVV
PLDHRITTLVQQKVQQQDELAKTQARLHADESKQTQTAAEQQQATQQLEQIQSYRQQHAH
HQQWGEQLPLWRTQFRQLRQLQDEQEKLKQKQTQHTAQSAVLQQETVTLAAEQREQQAVV
DAARQQFMQHDETQQKQDAHQSLSTLQQQFNQRIDQRAERQRLATISDQFQRLHVRKQQY
LAKQDEVQGHISQSEILKKQQQSEYEQRSQHLVDLETVLRQEERIVKLEAERQRLQAGDA
CPLCGSTEHPAIERYQALQPSETQSRLTALQQEVNQLTTALANTTAQLASLAQQREQLQQ
EIAQLDSEHHALRQQWQDVSERLQVNYTLEQPDEIAVWLTQNEAEEQAIRQQITAREQLQ
KQWQESKDLLTAAEAVQRELDQKIALNTQQQTSLSVTQQEIELSLQNVHQQITQHTQEIT
QTLATLSLVLPEADAQNDWLAQRENEWQVWKTKEQEQSRLVPLLATLESDLQHLNRSVTE
SKQQLQTQQQHVEQLLALLNASQKERQALFGDRQIAAVREQLQRTSQQYDDALRLALSAR
QQTETALSRLTGELASTQQQYEQSTRQHESATERFIQALQQSTFADEATFLNALLDEQER
QTLQAWKEELYQRLQQAAALHQQAEQDLLAHQQKRPASLMEDATQEAVQQQLATLDETLK
ANLRQQGEFQHQLANDRQHRQNQQDLLNEIAQSQQIYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDDLELLVMDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcagtctgcgcttaaagaaccttaatgcgctgaaaggcgaatggaagatc
gatttcacacaggagccgttttccagcaacggcttatttgccattaccggcccgaccggc
gcgggaaaaaccacgctgctggatgcgatctgtctggcgctgtatcacgaaacgccacgg
cttggcctgctttccgccagccagaatgacctgatgacgcgtaataccgcagagtgcctt
gctgaggttgagttcgaggttaaaggcgtcggatatcgcgccttctggagccagcgtcgg
gcaagaaacgcgccagacggcaacttacagtctcccaaagctgaactcgcgctcattgaa
gacggcaaaattctgtgtgaaaagctcaatgataagaaagagatgatcacacagctcacc
gggctggatttcggccgcttcacgcgatccatgatgctgtcgcaggggcaatttgccgcc
ttcctcaacgccaaagcagatgaccgagcggaactgctggaagagctgaccggcacggac
atctacggcctgatttccgaacgtgtctatgacaagcacaagcaggcaaacgtcgcactg
aacacgctacaggcgcgcgcatcaggcattcaactgctgaccgatgaccagcgtcagcag
gtggaagaacagcttgccgagctgatccagcaggagcaacggggcaacgtagaacgtgag
caagcgctgactacgctgcgctggtttgagcaactgacgcagcagcacgctcagctagcc
aacacgcaggcgcaacatgcgagcgccgaatccgctattcagcaggctaaaccgcagctc
gacaggttaactcacagcgaaccagcagaaaaactgaggccgctacatcaggaacgagag
cgctatcgacaggaatctcttacgctggcacagcgtattgaacaactgaccgggaagcag
gccgccgagcaggtgatgttaaccgcgctacgccagcaggaagaaaaagcagagctggag
gttagtgagcacaaacgggtacgccagcagcaagagcaagtgatcaacgaacaggttgtg
ccacttgaccatcgcattactacgctggtgcaacaaaaagtgcagcagcaggatgaactg
gcaaaaacacaggctcgtctgcacgccgatgaaagcaaacaaacccagacagcggcagaa
cagcagcaggctacacagcagcttgaacagatccagtcttaccgccagcaacacgcgcat
catcagcagtggggagaacaacttcctctgtggcgcacccagttccggcaattgcgccag
cttcaggacgagcaagagaagctgaagcaaaaacagacgcagcacaccgcacagtcggca
gtgctacagcaagagacggtgacgctggcggcagagcagcgtgaacaacaagcggtcgtt
gatgccgcccgtcagcagttcatgcaacacgatgagacacagcaaaaacaggacgcgcac
cagtcgctttccaccctgcaacagcagtttaatcaacgcattgaccagcgcgctgaacgc
caacggctcgcgacaatcagcgaccagttccagcgcctgcacgttcgcaaacaacagtac
ctagccaagcaggatgaggtacaagggcatatcagccagtcagaaatattgaagaaacag
cagcaatctgagtatgagcagcgaagccagcatctggtcgatctagaaacggtgctccgg
caggaagagcgtatcgttaagctggaagccgaacgccagcggctccaggctggagacgcg
tgtccgctatgtggttcaaccgagcatccggctatcgaacgctatcaggcgctgcaaccg
tctgaaacccaaagccgcctgacggcgctacagcaggaagtgaaccagttaacgacagcg
ctggcgaatacgactgcacagttggcctcgctagcgcaacagcgggaacagctacaacag
gagatcgctcagctcgatagcgaacatcatgccctgcggcaacagtggcaagatgtcagt
gagcgcttacaagttaactacacgctggaacaaccggatgagatcgcagtctggcttacg
caaaatgaagccgaagaacaggctattcgacagcagattaccgcacgcgagcaattgcaa
aaacagtggcaggaaagtaaggatttactgactgccgcagaggcagtgcagcgggaactc
gaccagaaaatcgcgctcaacacccagcagcaaacttcgctaagcgttacgcagcaagaa
atcgagctgtcgctgcaaaacgtgcaccagcagatcacgcagcacactcaggaaatcacg
cagacgctggcaaccttaagccttgttctacctgaagccgacgcacagaatgactggctg
gctcagcgcgagaacgagtggcaggtctggaaaaccaaagaacaggagcaatctcgctta
gttcctctattagcaacgctggaaagcgatcttcagcatctgaatcgcagcgtgaccgag
tcaaaacaacagctccaaacccagcaacagcacgtggaacagctcctcgcgttgctcaac
gcgagccaaaaagagcgacaggcacttttcggcgacagacaaatcgcggctgtacgcgaa
cagctacagcgcaccagccagcagtatgacgatgcgctcaggctagccctgtcagctcgt
cagcaaaccgaaacggcgttgagccgtctgacgggagagctggctagcacgcaacagcag
tatgaacagagcacgcgccagcatgaaagtgcgaccgaacgttttattcaggctttgcaa
caaagcactttcgccgatgaagccacgttcctcaatgcgctgcttgatgagcaggaacgc
cagacgttgcaggcatggaaggaagaactgtatcagcgtttgcagcaggcggcggccctt
catcagcaggctgagcaggatctgctcgcccatcaacaaaagcgccccgcttccctgatg
gaagatgccacgcaggaagcggtacagcaacagttggcaacgctggatgaaacgctgaaa
gcgaacctgcggcagcagggagagttccagcatcagttggctaacgatcgacaacatcgc
cagaaccagcaagatttgctcaatgagatcgcccaaagtcagcaaatatatgacgactgg
agctgtcttaatacgctcatcggttcacaaagcgggcataaattccgtaagtttgctcag
gggctaacgttggatcatctggtttatcttgccaatctccagctttcccgcctgcacggg
cgctatatgctgaaacggaagcccggcgacgatctggagttgctggtgatggatacctgg
caagcggacgccgagcgtgatacgcgtacgctgtccggcggcgagagcttcttagtgagt
ttgtcgctggcgctggcgctatccgatttggtcagccacaaagccagcatcgactcgctg
tttctggatgaaggcttcggcacgctggatgccgagacgctggatatcgcgctggatgcc
ctcgataatctgaacgcctccggtaaaaccatcggcgtcattagccatgtcgaagccatg
aaagagcgtattccggtacagatcaaagtgcagaaggttaacgggctaggcgtcagccgg
ctggcgccgcagtacgccgtttag
DBGET
integrated database retrieval system
