Pectobacterium parvum: LOZ86_16270
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Entry
LOZ86_16270 CDS
T07916
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppav03009
]
LOZ86_16270
03016 Transfer RNA biogenesis [BR:
ppav03016
]
LOZ86_16270
Ribosome biogenesis [BR:
ppav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LOZ86_16270
Transfer RNA biogenesis [BR:
ppav03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LOZ86_16270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
DUF6764
Motif
Other DBs
NCBI-ProteinID:
UFK38474
LinkDB
All DBs
Position
complement(3634411..3635562)
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AA seq
383 aa
AA seq
DB search
MSDSFNSKSGKVRVMYVRSDDEGEKENKNKRPAERDRRGDRRDGGGSRDQREKPKHPRDV
NPRYARENPSRDGDSNAKSPWGNKDRNERSGDKPRRPRGDDTGGYESPWKTVSRAPSDSE
TPDHGGITGKSHIDPEQLRRQRQEETRVYGENACQALFKNRSEVIVRAWFLQEVTPRFRD
ALRWMAANRKAYHVVEEEELVKASGTEHHGGVCFLIKKRQGMDVREYLKTAGEQDCVLAL
EDVGNPHNLGGIMRSCAHFGVKGVLVQDAALLESGAAVRTAEGGAEHVKAINADDFLSVL
TEFRNAGYTIVTTSSHKGTALSQATLPAKTVIVLGQEGDGLSDSAWQQGDVKVSIGGTGK
VESLNISVATGILLSEWWRQNQA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcattcaatagtaaaagcggcaaagtccgtgtgatgtacgtccgcagtgat
gatgagggcgagaaagagaataaaaacaagcgccctgctgaaagagatcgccgtggcgat
cggcgtgatggcggcggctctcgcgatcaacgcgaaaagccgaagcatccacgtgatgtt
aacccgcgctatgcccgggaaaatccgtcccgcgacggcgatagcaatgcgaaatcgccg
tggggcaataaagatcgtaacgaacgcagcggtgataagcctcgccggccgcgcggtgac
gataccggtggttatgaatcaccgtggaaaaccgtgtcccgtgcgccaagcgacagcgaa
acgccggaccatggcggtatcacaggcaagagccatatcgatcctgagcaactgcgtcgc
cagcgtcaggaagaaacacgtgtctacggcgaaaatgcctgtcaggcgctgtttaaaaac
cgttctgaagtgatcgttcgagcctggttcctgcaagaagtgacgccgcgtttccgcgat
gcactgcgctggatggcggcaaaccgcaaggcttaccatgtcgtggaagaggaagagctg
gttaaggcttccggcaccgagcaccacggcggcgtgtgtttcctgattaaaaagcgtcag
ggaatggatgtgcgtgagtacctgaaaacggctggcgagcaagactgtgtactggcgctg
gaagatgtgggtaacccgcacaacctcggcggcattatgcgcagctgcgcgcatttcggt
gtgaaaggcgtgctggtgcaggatgcggcgctgctggaatccggtgcagccgtacgcacg
gcagaaggcggtgcggaacacgttaaagcgatcaacgctgacgatttcctgtccgtgttg
acggagttccgtaacgcaggctataccatcgtgaccacgtccagccataaaggcacggca
ttgtcgcaagcgacgcttccggcgaaaaccgtgatcgtgctgggtcaggaaggtgatggt
ctgtcggatagcgcttggcagcagggggacgtgaaagtctctatcggcggtaccggtaag
gttgaaagtctgaatatttccgtcgctacgggcattttgctgtccgagtggtggcgacag
aaccaggcctga
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