Pectobacterium parvum: LOZ86_16880
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Entry
LOZ86_16880 CDS
T07916
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppav03029
]
LOZ86_16880 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_16880 (bamA)
Mitochondrial biogenesis [BR:
ppav03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
LOZ86_16880 (bamA)
Transporters [BR:
ppav02000
]
Other transporters
Pores ion channels [TC:
1
]
LOZ86_16880 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
DUF1882
Motif
Other DBs
NCBI-ProteinID:
UFK38575
LinkDB
All DBs
Position
complement(3742971..3745400)
Genome browser
AA seq
809 aa
AA seq
DB search
MAIKKLLIASLLFSSATVYGADGFVVKDIHFEGLQRVAVGAALLSMPVRVGDTIGDDDIG
NTIRALFATGNFEDVRVLRDGETLIVQVKERPTIASVTFSGNKSVKDDMLKENLEASGVR
VGEALDRTALTNIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFTEGVSAKIQQI
NIVGNKAFSSDELISRFQLRDEVPWWNVVGDRKYQKQKLSGDLETLRSFYLDRGYARFNI
DSTQVSLTPDKKGIYITINMTEGEQYKLSGVTVKGNLAGHSAEVEGLTKVEPGELYNGTK
VTRMEEDIKKLLGRYGYAYPRVVTQPEINDADKTVRLNINVDAGNRFYVRHIRFDGNDTS
KDSVLRREMRQMEGAWLGNDLVEQGKERLNRLGYFESVDVETQRVPGVADQVDVTYKVKE
RNTGTFNFGVGFGTESGVSFQAGVQQDNWLGTGNSVGISGTKNDYQTYVELSLTDPYFTV
DGVSLGGRVFYNKFEASDADLSDYTNVSYGVGSTLGFPINENNSLRVGLDYVHNDLSDMR
PQVAMWRYLDSVGVNPSVVGENVKSSADFKANDFFLNTGWSYNNLDRGYFPTKGTRASAN
AKIAVPGSDNEYYKLTFDSASYYPLSDSGKWVVMGRTRAGFADGIGSKEVPFYDNFYAGG
SSTVRGFQSNTIGPKAAYYNCAVGATSYSGCPIDKTNLDDAVGGNAMAVLSAELIVPTPF
ISDKYASSVRTSFFVDGGTVWDTNWKNTQETIDAGVPDYSKASNFRVSSGIALQWMSPLG
PLVFSYAQPVKKYDGDKSEQFQFNIGKTW
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaaaagttgctcatagcgtcgctgctgtttagcagcgcaaccgtatacggt
gcagacgggttcgtagtgaaggacattcatttcgagggcctgcaaagggttgccgtcggg
gcggcattactcagtatgccagtccgcgttggtgataccatcggtgacgatgatatcggt
aacaccatccgtgccttgtttgcgaccggaaattttgaagatgttcgtgtcctgcgcgat
ggcgaaacgctgattgtgcaggtgaaagaacgtccaacaatcgccagcgtcacgttttcc
ggcaataagtccgtcaaagacgacatgctgaaagaaaacttggaggcatccggcgtgcgc
gtcggtgaagcgttagaccgcacggcgctcaccaacatcgaaaaaggactggaagatttc
tactacagcgtgggtaagtacagtgcgtcggttaaagccgttgtcacgccactcccgcgt
aaccgtgtagaccttaaactggtcttcacagaaggcgtttccgccaagatccagcagatt
aatattgtcggtaacaaagcgttcagctccgacgaattgatttcccgcttccaactgcgt
gacgaagtgccgtggtggaacgtagttggcgatcgtaaataccagaaacaaaaactgtct
ggcgatctggaaacgttacggagtttctatctggatcgcggctatgcgcgtttcaacatt
gattccacgcaagtgagcctgacgccggataaaaaaggtatttatatcaccatcaatatg
acggaaggtgagcagtacaagctgtctggcgtcacggtgaaaggtaatctggctggtcac
tctgcggaagtcgaagggctgacgaaggtcgaaccaggtgaactctacaacgggacgaaa
gtgactcggatggaagaggacatcaagaaactgctaggtcgttatggctatgcctatccg
cgcgtggttacacagccggaaattaatgacgcagataagacggtgagattaaacatcaac
gtcgatgcgggtaaccgtttctatgtgcgtcatatccgctttgacggtaacgacacgtct
aaagactccgttctgcgccgtgaaatgcgtcaaatggaaggtgcctggttaggtaacgat
ctggttgagcagggcaaagagcgtctgaaccgactgggatactttgaaagcgttgatgta
gaaacgcagcgcgttcccggcgtggccgatcaggttgatgtaacgtataaagtcaaagag
cgtaatacgggtacattcaactttggtgtcggtttcggtacagaaagtggcgtgagtttc
caggctggggttcagcaggacaactggctgggaacgggtaactccgttggtatcagcggg
actaaaaacgactaccagacgtatgtcgagctgtcactgactgacccgtactttaccgtt
gatggcgttagcctcggtggccgtgtcttctataacaaatttgaggcatctgacgccgat
ctgtccgactataccaacgtgagctatggcgttggcagcaccttgggcttcccgattaac
gagaataactcactgcgtgtcggtctggattatgtgcataacgatctgtcggatatgaga
ccgcaggtggcgatgtggcgttatctggattccgtgggtgttaatccatccgtggttggc
gaaaacgtcaaatccagcgctgacttcaaagcgaacgatttcttcctgaacaccggatgg
tcttataacaatctggatcgcggctacttcccgacgaaaggaacacgtgcgtctgcgaat
gccaagattgccgtgccaggttcggacaacgaatactataaactgacgtttgattcggcg
agctactacccgttgagcgacagcggtaaatgggtggtgatgggccgtacgcgcgcaggc
tttgcggatggtatcggtagcaaagaagtgccgttctacgacaacttctatgccggtggt
tccagtacggtacgtggcttccagtcgaacacgattggtcctaaagcggcatattacaac
tgtgcggtgggtgcgacgtcttattccggttgcccgattgataaaaccaatctggatgat
gccgttggcggtaacgcgatggcggtattgagtgcagaactgatcgtgccaacaccgttt
atcagtgataaatacgcgagctccgtacggacttccttctttgtggatggcggtacggta
tgggataccaactggaaaaatacacaggaaacgattgacgcaggcgtgccggattacagc
aaggcgagcaacttccgtgtttccagcggtatcgcgttgcaatggatgtctccgcttggg
ccattggtcttctcctatgcccagccggttaaaaagtacgatggagacaagtcggaacaa
ttccagtttaacattggcaaaacctggtag
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