Pectobacterium parvum: LOZ86_17225
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Entry
LOZ86_17225 CDS
T07916
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00330
Arginine and proline metabolism
ppav00480
Glutathione metabolism
ppav01100
Metabolic pathways
ppav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LOZ86_17225
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LOZ86_17225
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LOZ86_17225
Enzymes [BR:
ppav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
LOZ86_17225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UFK38634
LinkDB
All DBs
Position
complement(3817269..3819422)
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AA seq
717 aa
AA seq
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MKQLKIAANAAVATRLITTREIVALSQTDFTDVAAVVVSIEEARSGILSILQHTGFSIPA
FVEEPDEDKELDVLPAGSEWLILDDEGEHANMLERAAKAYQDAILPPFFDTLTKYVNMKN
TTFACPGHQGGQFFRKHPAGRQFFEFYGENVFRSDICNADVKLGDLLIHEGAAKKAQKHA
ARVFNADKTYFVLNGTSSANKVVTNALLARGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TVRNPFGFIGGVDAHCFDEAYLRKLIAEVAPERANEARPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLDLNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDTHIKGQRRFCNHKQLNNAFMLHASTSPFYPLFAALDVNAKMHEGASGRRMWMD
CVKLGIEARKQLLTRCSLIKPFVPVTVGGALWQDHDTETIAQDVRFFNFEPGEKWHAFEG
YAEDQYFIDPCKLLLTTPGIDATSGDYTEFGIPATILANYLREHGIIPEKCDMNSILFLL
TPAEDAAKMQELVNALVHFETLIARDAPLSEVLPSLYQKYKERYRGYRLRRLCQEMHDFY
AQHNVKDLQKAMFRKTEFPSVVMLPQDANREFVRGNIELIPIDEAEGRIAAEGALPYPPG
VLCVVPGETWGGAVQRYFLALEAGINLLPGFSPELQGVYSVAEEDGSKRLYGYVVEQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggcgaatgcagcggttgccacccgtttaatcacaacgcgc
gagattgtcgcgttgagtcagactgacttcactgatgtggcggcggtcgtggtttctatt
gaggaagcccgcagcggtattctgtcgatattgcagcacaccggttttagtattccggcg
tttgtcgaagagcctgatgaagataaagagttagatgtgctgcctgcgggtagcgaatgg
ctgattctcgatgatgaaggtgagcatgcgaacatgctggagcgtgcggcgaaagcctat
caggatgcgatattgccgccgtttttcgatacgctgaccaagtacgtcaacatgaaaaac
acgacgtttgcctgcccggggcatcagggcggtcagttcttccgcaagcatccggcgggg
cgtcagttttttgagttttacggtgagaacgtttttcgttcggacatttgtaacgcggac
gtcaaactgggcgatttgctgatccatgaaggggcagcgaagaaggcgcagaagcacgct
gcacgcgtgtttaacgccgataaaacctatttcgtgttgaacggcacctcctctgcgaac
aaagtggtgacgaacgcgctgctggcgcgtggcgatctggtgctgtttgaccgcaacaac
cataaatccaaccatcacggtgcgctgattcaggcgggtgcgacgccagtctatctggaa
accgtacgcaatccgttcggctttatcggcggcgtggatgcgcactgttttgacgaagcc
tatctgcgcaagctgattgcggaagttgcaccggaacgtgccaacgaggcgcgcccgttc
cgtctggccgtcatccagctcggcacctatgacggcacgatttataacgcgcgtcaggtg
gtcgatagcatcgggcatctgtgcgactacattctgtttgactccgcctgggtcggctac
gagcagtttatcccgatgatggagcagtgctcgccgctgttgctggatctgaatgagaac
gatccggggattttcgtgactcagtcggtacataagcagcaggccggtttctcccagact
tcgcagatccacaagaaagatacccacatcaaaggccagcgtcgtttctgcaaccataag
cagctgaataacgcctttatgctgcatgcttcgaccagcccgttttatccgctgtttgct
gccctagacgtcaatgccaaaatgcatgaaggggcaagcgggcgtcgtatgtggatggac
tgcgtgaagctgggcattgaggcgcgtaagcagttgctgacgcgttgttcgctcatcaaa
ccgttcgtacccgtgacggtaggcggcgcgctctggcaggatcacgatacagagacgatc
gcgcaggacgtgcgcttcttcaattttgagccgggcgagaaatggcatgcgttcgaaggg
tacgccgaggatcagtattttatcgatccttgcaagttactgctgacgacgccgggcatt
gatgcgactagcggcgattataccgaatttggtattccggcgacgatccttgctaactat
ctgcgcgagcacggcattatccctgaaaaatgcgacatgaactcaatcctgttcctgcta
acgccagcggaagacgctgccaaaatgcaggagctggtgaatgcgctggtgcatttcgag
acgctgatcgcccgcgatgcgccgctgagtgaagtgctgcctagcctgtaccagaaatac
aaagagcgttatcgcggctaccgactgcgtcggctgtgtcaggaaatgcatgatttttac
gcgcagcacaacgtgaaagatctgcaaaaagcgatgttccgcaaaaccgagtttccgtcc
gtggtgatgttgccacaggatgctaacagggaatttgtgcgcgggaatatcgagctgatt
cctatcgacgaagcggaaggccgtatcgcggcagaaggggcattgccgtatccgccgggc
gtactgtgtgtcgtgccgggggaaacctggggcggggcggtacagcgctattttctggcg
ttggaagcgggtattaacctgttaccgggcttctctccggaattgcagggcgtttacagc
gttgcggaagaagatggcagcaagcgtctgtacggttacgtggtagaacagtaa
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